Applications

hgpu.org » Applications

Accelerating complex brain-model simulations on GPU platforms

H.A. Du Nguyen, Zaid Al-Ars, Georgios Smaragdos, Christos Strydis

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Tags: Biology, CUDA, nVidia, nVidia GeForce GT 640, nVidia GeForce GTX 480, Tesla C2075, Tesla K20

March 30, 2015 by hgpu

High Performance Computing for solving large sparse systems. Optical Diffraction Tomography as a case of study

Gloria Ortega Lopez

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Tags: Computer science, CUDA, Differential equations, FEM, Finite difference, Finite element method, GPU cluster, Heterogeneous systems, Linear Algebra, nVidia, nVidia GeForce GTX 480, nVidia GeForce GTX 680, Package, Partial differential equations, PDEs, Sparse matrix, Tesla C2050, Tesla M2070, Tesla M2090, Thesis, Tomography

March 30, 2015 by hgpu

Real-time multi-view deconvolution

Benjamin Schmid, Jan Huisken

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Tags: Biology, CUDA, Microscopy, nVidia, nVidia GeForce GTX Titan, Package

March 30, 2015 by hgpu

Loo.py: From Fortran to performance via transformation and substitution rules

Andreas Klockner

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Tags: Code generation, Computer science, Fortran, OpenCL, Package, Python

March 28, 2015 by hgpu

Parallel Unsteady Flow Line Integral Convolution for High-Performance Dense Visualization

Zi'ang Ding, Zhanping Liu, Yang Yu, Wei Chen

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Tags: CUDA, Fluid dynamics, Image generation, nVidia, nVidia GeForce GTX 590, Visualization

March 28, 2015 by hgpu

Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space

Richard Wilton, Tamas Budavari, Ben Langmead, Sarah J. Wheelan, Steven L. Salzberg, Alexander S. Szalay

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Sequence alignment, Tesla K20

March 28, 2015 by hgpu

Shortest-Path Queries in Planar Graphs on GPU-Accelerated Architectures

Guillaume Chapuis, Hristo Djidjev

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Tags: Computer science, Data Structures and Algorithms, Distributed computing, Distributed data structures, GPU cluster, nVidia, Path problems, Tesla M2090

March 28, 2015 by hgpu

PErasure: a Parallel Cauchy Reed-Solomon Coding Library for GPUs

Xiaowen Chu, Chengjian Liu, Kai Ouyang, Ling Sing Yung, Hai Liu, Yiu-Wing Leung

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Tags: Computer science, CUDA, Error recovery, nVidia, nVidia GeForce GTX 780

March 28, 2015 by hgpu

Pseudorandom Numbers Generation for Monte Carlo Simulations on GPUs: OpenCL Approach

Vadim Demchik

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Tags: ATI, ATI Radeon HD 5870, ATI Radeon HD 6970, Computer science, Monte Carlo simulation, nVidia, nVidia GeForce GTX 560, nVidia GeForce GTX 560 M, nVidia GeForce GTX 780, OpenCL, Package, Pseudo-random number generators, Review, Tesla K40

March 25, 2015 by hgpu

Energy-efficient Computing on Distributed GPUs using Dynamic Parallelism and GPU-controlled Communication

Lena Oden, Benjamin Klenk, Holger Froning

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Tags: Cluster computing, Computer science, CUDA, Distributed computing, Energy-efficient computing, GPU cluster, nVidia, Tesla K20

March 25, 2015 by hgpu

Analysis of illumination conditions at the lunar south pole using parallel computing techniques

Ramiro Marco Figuera

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Tags: Earth and Space Sciences, nVidia, nVidia Quadro FX 1800, OpenCL, Thesis

March 25, 2015 by hgpu

The Feasibility of Using OpenCL Instead of OpenMP for Parallel CPU Programming

Kamran Karimi

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Tags: ATI, Computer science, OpenCL, OpenMP, Performance

March 25, 2015 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

Accelerating complex brain-model simulations on GPU platforms

High Performance Computing for solving large sparse systems. Optical Diffraction Tomography as a case of study

Real-time multi-view deconvolution

Loo.py: From Fortran to performance via transformation and substitution rules

Parallel Unsteady Flow Line Integral Convolution for High-Performance Dense Visualization

Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space

Shortest-Path Queries in Planar Graphs on GPU-Accelerated Architectures

PErasure: a Parallel Cauchy Reed-Solomon Coding Library for GPUs

Pseudorandom Numbers Generation for Monte Carlo Simulations on GPUs: OpenCL Approach

Energy-efficient Computing on Distributed GPUs using Dynamic Parallelism and GPU-controlled Communication

Analysis of illumination conditions at the lunar south pole using parallel computing techniques

The Feasibility of Using OpenCL Instead of OpenMP for Parallel CPU Programming

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

Most viewed papers (last 30 days)