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DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

Yongchao Liu, Bertil Schmidt, Douglas Maskell

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Tags: Bioinformatics, Biology, CUDA, MPI, Next-Generation sequencing, nVidia, OpenMP, Package, Tesla S1070

April 11, 2011 by hgpu

Simulation of bevel gear cutting with GPGPUs-performance and productivity

Sandra Wienke, Dmytro Plotnikov, Dieter an Mey, Christian Bischof, Ario Hardjosuwito, Christof Gorgels, Christian Brecher

Tags: Computational Engineering, Computer science, CUDA, nVidia, OpenCL, OpenMP

April 11, 2011 by hgpu

GPU Accelerated Adams-Bashforth Multirate Discontinuous Galerkin FEM Simulation of High-Frequency Electromagnetic Fields

Nico Godel, Steffen Schomann, Tim Warburton, Markus Clemens

Tags: CUDA, Electrodynamics, Electromagnetics simulation, FEM, Finite element method, nVidia

April 10, 2011 by hgpu

GPU acceleration of the dynamics routine in the HIRLAM weather forecast model

Van Thieu Vu, Gerard Cats, Lex Wolters

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Tags: CUDA, Earth and Space Sciences, nVidia, nVidia GeForce 9800 GX2, Weather Prediction Model

April 10, 2011 by hgpu

Real-time stereo matching: A cross-based local approach

Jiangbo Lu, Ke Zhang, Gauthier Lafruit, Francky Catthoor

Tags: Algorithms, Image processing, Real-time graphics

April 10, 2011 by hgpu

Accelerating global sequence alignment using CUDA compatible multi-core GPU

T.R.P. Siriwardena, D.N. Ranasinghe

Tags: Bioinformatics, Biology, CUDA, nVidia, Sequence alignment

April 10, 2011 by hgpu

A Parallel Algorithm for Dot Product over Word-Size Finite Field Using Floating-Point Arithmetic

Jeremy Jean, Stef Graillat

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Tags: Algorithms, Computer science, CUDA, Floating point error, nVidia, Tesla C1060

April 10, 2011 by hgpu

Fast seismic modeling and Reverse Time Migration on a GPU cluster

Rached Abdelkhalek, Henri Calendra, Olivier Coulaud, Jean Roman, Guillaume Latu

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Tags: CUDA, Earth and Space Sciences, Finite difference, GPU cluster, nVidia, Seismic modeling, Seismology, Tesla S1070

April 10, 2011 by hgpu

Real-time Minute Change Detection on GPU for Cellular and Remote Sensor Imaging

Sinan Kockara, Tansel Halic, Coskun Bayrak

Tags: Algorithms, Image processing, Real-time graphics

April 10, 2011 by hgpu

Depth-of-Field Blur Effects for First-Person Navigation in Virtual Environments

Sebastien Hillaire, Anatole Lecuyer, Remi Cozot, Gery Casiez

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Tags: Algorithms, Computer science, Filtering, Games, Rendering

April 9, 2011 by hgpu

An approach of tool paths generation for CNC machining based on CUDA

Yu Wujia, Zhou Yajun

Tags: Algorithms, CAD, Computer science, CUDA, nVidia

April 9, 2011 by hgpu

Scalable instruction set simulator for thousand-core architectures running on GPGPUs

Shivani Raghav, Martino Ruggiero, David Atienza, Christian Pinto, Andrea Marongiu, Luca Benini

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 295, Programming techniques

April 9, 2011 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Programming

DecGPU: distributed error correction on massively parallel graphics processing units using CUDA and MPI

Simulation of bevel gear cutting with GPGPUs-performance and productivity

GPU Accelerated Adams-Bashforth Multirate Discontinuous Galerkin FEM Simulation of High-Frequency Electromagnetic Fields

GPU acceleration of the dynamics routine in the HIRLAM weather forecast model

Real-time stereo matching: A cross-based local approach

Accelerating global sequence alignment using CUDA compatible multi-core GPU

A Parallel Algorithm for Dot Product over Word-Size Finite Field Using Floating-Point Arithmetic

Fast seismic modeling and Reverse Time Migration on a GPU cluster

Real-time Minute Change Detection on GPU for Cellular and Remote Sensor Imaging

Depth-of-Field Blur Effects for First-Person Navigation in Virtual Environments

An approach of tool paths generation for CNC machining based on CUDA

Scalable instruction set simulator for thousand-core architectures running on GPGPUs

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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