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Accelerating molecular dynamics simulations using Graphics Processing Units with CUDA

W. Liu, B. Schmidt, G. Voss, W. Mullerwittig

Tags: Chemistry, CUDA, Molecular dynamics, nVidia

December 11, 2010 by hgpu

Biomedical image analysis on a cooperative cluster of GPUs and multicores

Timothy D.R. Hartley, Umit Catalyurek, Antonio Ruiz, Francisco Igual, Rafael Mayo, Manuel Ujaldon

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Tags: CUDA, Image processing, Medicine, nVidia, nVidia Quadro FX 5600

December 10, 2010 by hgpu

Parallel computing with graphics processing units for high-speed Monte Carlo simulation of photon migration

Erik Alerstam, Tomas Svensson, Stefan A. Engels

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Tags: CUDA, Monte Carlo simulation, nVidia, nVidia GeForce 8800 GT, Optics, Package, Physics

December 10, 2010 by hgpu

Graphical Processing Units for Quantum Chemistry

I. S. Ufimtsev, T. J. Martinez

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Tags: Chemistry, Computational chemistry, CUDA, Molecular modeling, nVidia, nVidia GeForce 8800 GTX

December 10, 2010 by hgpu

GPU-based fast gamma index calcuation

Xuejun Gu, Xun Jia, Steve B. Jiang

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Tags: CUDA, Medical Physics, Medicine, nVidia, Radiotherapy, Tesla C1060

December 10, 2010 by hgpu

Exploiting the Power of GPUs for Asymmetric Cryptography

Robert Szerwinski, Tim Guneysu

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 8800 GTS, Security

December 8, 2010 by hgpu

Pathological image segmentation for neuroblastoma using the GPU

A. Ruiz, Jun Kong, M. Ujaldon, K. Boyer, J. Saltz, M. Gurcan

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Tags: CUDA, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTX

December 8, 2010 by hgpu

Fast and exact solution of Total Variation models on the GPU

T. Pock, M. Unger, D. Cremers, H. Bischof

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce 8800 GTX

December 8, 2010 by hgpu

Fast Deformable Registration on the GPU: A CUDA Implementation of Demons

P. Muyan-Ozcelik, J. D. Owens, Junyi Xia, S. S. Samant

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Tags: Computed tomography, CT, CUDA, Image processing, Image registration, nVidia, nVidia Quadro FX 5600

December 8, 2010 by hgpu

Performance evaluation of image processing algorithms on the GPU

Daniel Castano-Diez, Dominik Moser, Andreas Schoenegger, Sabine Pruggnaller, Achilleas S S. Frangakis

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Tags: Biology, CUDA, Image processing, Medicine, nVidia, nVidia Quadro FX 5600, Pattern recognition, Tomography

December 7, 2010 by hgpu

Fast support vector machine training and classification on graphics processors

Bryan Catanzaro, Narayanan Sundaram, Kurt Keutzer

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Tags: Algorithms, Computer science, CUDA, MapReduce, nVidia, nVidia GeForce 8800 GTX

December 7, 2010 by hgpu

Bandwidth intensive 3-D FFT kernel for GPUs using CUDA

Akira Nukada, Yasuhiko Ogata, Toshio Endo, Satoshi Matsuoka

Tags: Computer science, CUDA, FFT, nVidia

December 7, 2010 by hgpu

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Dr. Kernel: Reinforcement Learning Done Right for Triton Kernel Generations

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

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high performance computing on graphics processing units: hgpu.org

Programming

Accelerating molecular dynamics simulations using Graphics Processing Units with CUDA

Biomedical image analysis on a cooperative cluster of GPUs and multicores

Parallel computing with graphics processing units for high-speed Monte Carlo simulation of photon migration

Graphical Processing Units for Quantum Chemistry

GPU-based fast gamma index calcuation

Exploiting the Power of GPUs for Asymmetric Cryptography

Pathological image segmentation for neuroblastoma using the GPU

Fast and exact solution of Total Variation models on the GPU

Fast Deformable Registration on the GPU: A CUDA Implementation of Demons

Performance evaluation of image processing algorithms on the GPU

Fast support vector machine training and classification on graphics processors

Bandwidth intensive 3-D FFT kernel for GPUs using CUDA

Recent source codes

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Vortex-Optimized Light-weight Toolchain (VOLT)

SciDef: Automated Definition Extraction from Scientific Literature

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

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