high performance computing on graphics processing units: hgpu.org

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Accelerating finite-rate chemical kinetics with coprocessors: comparing vectorization methods on GPUs, MICs, and CPUs

Christopher P. Stone, Kyle E. Niemeyer

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Tags: Computational Physics, Computer science, Differential equations, Intel Xeon Phi, nVidia, ODEs, OpenCL, Ordinary differential equations, Physics, Tesla K20

August 28, 2016 by hgpu

MetaMorph: A Library Framework for Interoperable Kernels on Multi- and Many-core Clusters

Ahmed E. Helal, Paul Sathre, Wu-chun Feng

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Tags: ATI, ATI Radeon HD 7970, Computer science, CUDA, Fluid dynamics, Heterogeneous systems, Intel Xeon Phi, MPI, nVidia, OpenCL, performance portability, Tesla K20

August 23, 2016 by hgpu

GPU-accelerated Gibbs Sampling

Alexander Terenin, Shawfeng Dong, David Draper

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Tags: Bayesian, big data, CUDA, nVidia, Statistics, Tesla K20

August 18, 2016 by hgpu

SkePU 2: Language Embedding and Compiler Support for Flexible and Type-Safe Skeleton Programming

August Ernstsson

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, OpenCL, OpenMP, Programming techniques, Tesla K20, Thesis

August 18, 2016 by hgpu

Drug Drug Interaction Extraction from Biomedical Literature Using Syntax Convolutional Neural Network

Zhehuan Zhao, Zhihao Yang, Ling Luo, Hongfei Lin, Jian Wang

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Tags: Bioinformatics, Biology, CUDA, Deep learning, Neural networks, NLP, nVidia, Package, Python, Tesla K20, Text mining

August 1, 2016 by hgpu

Genetic Improvement of GPU Software

William B. Langdon, Brian Yee Hong Lam, Marc Modat, Justyna Petke, Mark Harman

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Tags: Algorithms, Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce GTX 580, Tesla C2050, Tesla K20, Tesla T10

July 28, 2016 by hgpu

FPGA-Based Accelerator Design from a Domain-Specific Language

M. Akif Ozkan, Oliver Reiche, Frank Hannig, Jurgen Teich

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Tags: Algorithms, Computer vision, FPGA, Heterogeneous systems, Image processing, nVidia, nVidia Jetson TK1, OpenCL, Tesla K20

July 26, 2016 by hgpu

THOR: A New and Flexible Global Circulation Model to Explore Planetary Atmospheres

Joao M. Mendonca, Simon L. Grimm, Luc Grosheintz, Kevin Heng

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Tags: Astrophysics, CUDA, Earth and Planetary Astrophysics, Earth and Space Sciences, nVidia, Tesla K20

July 20, 2016 by hgpu

Stability and Performance of Various Singular Value QR Implementations on Multicore CPU with a GPU

Ichitaro Yamazaki, Stanimire Tomov, Jack Dongarra

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Tags: BLAS, Computer science, CUDA, Linear Algebra, Matrix decomposition, Mixed precision, Numerical Analysis, nVidia, Performance, Tesla K20

July 16, 2016 by hgpu

Finite Element Integration with Quadrature on the GPU

Matthew G. Knepley, Karl Rupp, Andy R. Terrel

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Tags: AMD FirePro W9100, ATI, Computer science, Differential equations, Mathematical Software, nVidia, nVidia GeForce GTX 580, nVidia GeForce GTX 750 Ti, OpenCL, Partial differential equations, PDEs, Tesla K20

July 16, 2016 by hgpu

The Vectorization of the Tersoff Multi-Body Potential: An Exercise in Performance Portability

Markus Hohnerbach, Ahmed E. Ismail, Paolo Bientinesi

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Tags: Chemistry, Computational chemistry, Computer science, CUDA, Intel Xeon Phi, Materials Science, Molecular dynamics, MPI, nVidia, Package, performance portability, Tesla K20, Tesla K40

July 13, 2016 by hgpu

Using Deep Convolutional Neural Networks in Monte Carlo Tree Search

Tobias Graf, Marco Platzner

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Tags: Algorithms, CNN, Computer science, CUDA, Deep learning, Neural networks, nVidia, Search, Tesla K20

July 11, 2016 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Accelerating finite-rate chemical kinetics with coprocessors: comparing vectorization methods on GPUs, MICs, and CPUs

MetaMorph: A Library Framework for Interoperable Kernels on Multi- and Many-core Clusters

GPU-accelerated Gibbs Sampling

SkePU 2: Language Embedding and Compiler Support for Flexible and Type-Safe Skeleton Programming

Drug Drug Interaction Extraction from Biomedical Literature Using Syntax Convolutional Neural Network

Genetic Improvement of GPU Software

FPGA-Based Accelerator Design from a Domain-Specific Language

THOR: A New and Flexible Global Circulation Model to Explore Planetary Atmospheres

Stability and Performance of Various Singular Value QR Implementations on Multicore CPU with a GPU

Finite Element Integration with Quadrature on the GPU

The Vectorization of the Tersoff Multi-Body Potential: An Exercise in Performance Portability

Using Deep Convolutional Neural Networks in Monte Carlo Tree Search

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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