high performance computing on graphics processing units: hgpu.org

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An Improved Parallel Algorithm using GPU for Siting Observers on Terrain

Guilherme C. Pena, Marcus V. A. Andrade, Salles V. G. Magalhaes, W. R. Franklin, Chaulio R. Ferreira

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Tags: Algorithms, Computer science, CUDA, nVidia, Search strategies, Tesla K20

June 6, 2014 by hgpu

High-Speed GPU-Based Fully Three-Dimensional Diffuse Optical Tomographic System

Manob Jyoti Saikia, Rajan Kanhirodan, Ram Mohan Vasu

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Tags: CUDA, FEM, Finite element method, Image processing, Medicine, nVidia, Tesla K20, Tomography

June 6, 2014 by hgpu

Performance models for CPU-GPU data transfers

B. van Werkhoven, J. Maassen, F.J. Seinstra, H.E. Bal

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Tags: Computer science, CUDA, nVidia GeForce GTX 680, nVidia GeForce GTX Titan, PCIe, Performance, Performance prediction, Tesla K20

June 5, 2014 by bennotsi

Integrated Modelling of Hydrodynamic Processes, Faecal Indicator Organisms and Related Parameters with Improved Accuracy using Parallel (GPU) Computing

Brian Adjetey Boye

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Tags: CUDA, Earth and Space Sciences, nVidia, nVidia GeForce GTX 590, Tesla K10, Tesla K20, Thesis

June 2, 2014 by hgpu

Multi-target DPA attacks: Pushing DPA beyond the limits of a desktop computer

Luke Mather, Elisabeth Oswald, Carolyn Whitnall

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Tags: AMD Radeon R9 290, ATI, Computational Complexity, Computer science, nVidia, nVidia GeForce GTX Titan, OpenCL, Security, Tesla K20

June 2, 2014 by hgpu

Efficient Implementation of Hyperspectral Anomaly Detection Techniques on GPUs and Multicore Processors

Jose M. Molero, Ester M. Garzon, Inmaculada Garcia, Enrique S. Quintana-Orti, Antonio Plaza

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Tags: Algorithms, CUDA, Data acquisition, Hyperspectral imaging, Image processing, nVidia, Tesla K20

June 1, 2014 by hgpu

A Performance Model for the Communication in Fast Multipole Methods on HPC Platforms

Huda Ibeid, Rio Yokota, David Keyes

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Tags: Algorithms, Astrophysics, Computer science, CUDA, Fast multipole method, Molecular dynamics, N-body simulation, nVidia, Physics, Tesla K20

June 1, 2014 by hgpu

Evaluating GPU Passthrough in Xen for High Performance Cloud Computing

Andrew J. Younge, John Paul Walters, Stephen Crago, Geoffrey C. Fox

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Tags: Cloud, Computer science, CUDA, nVidia, Tesla C2075, Tesla K20, Virtualization

June 1, 2014 by hgpu

Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization

Paolo Cazzaniga, Marco S. Nobile, Daniela Besozzi, Matteo Bellini, Giancarlo Mauri

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Tags: Bioinformatics, Biology, Computational biology, CUDA, Differential equations, nVidia, ODEs, Ordinary differential equations, Tesla K20

May 30, 2014 by hgpu

Performance Evaluation of Quicksort with GPU Dynamic Parallelism for Gene-Expression Quantile Normalization

Roberto Pinto Souto, Carla Osthoff, Douglas Augusto, Oswaldo Trelles, Ana Tereza Ribeiro de Vasconcelos

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, Sorting, Tesla K20

May 29, 2014 by hgpu

GPU Passthrough Performance: A Comparison of KVM, Xen, VMWare ESXi, and LXC for CUDA and OpenCL Applications

John Paul Walters, Andrew J. Younge, Dong-In Kang, Ke-Thia Yao, Mikyung Kang, Stephen P. Crago, Geoffrey C. Fox

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Tags: Cloud, Computer science, CUDA, nVidia, OpenCL, Tesla C2075, Tesla K20, Virtualization

May 26, 2014 by hgpu

GPU-BSM: A GPU-Based Tool to Map Bisulfite-Treated Reads

Andrea Manconi, Alessandro Orro, Emanuele Manca, Giuliano Armano, Luciano Milanesi

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Source codes

Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 480, Package, Python, Sequence alignment, Tesla K10, Tesla K20

May 25, 2014 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

An Improved Parallel Algorithm using GPU for Siting Observers on Terrain

High-Speed GPU-Based Fully Three-Dimensional Diffuse Optical Tomographic System

Performance models for CPU-GPU data transfers

Integrated Modelling of Hydrodynamic Processes, Faecal Indicator Organisms and Related Parameters with Improved Accuracy using Parallel (GPU) Computing

Multi-target DPA attacks: Pushing DPA beyond the limits of a desktop computer

Efficient Implementation of Hyperspectral Anomaly Detection Techniques on GPUs and Multicore Processors

A Performance Model for the Communication in Fast Multipole Methods on HPC Platforms

Massive exploration of perturbed conditions of the blood coagulation cascade through GPU parallelization

Performance Evaluation of Quicksort with GPU Dynamic Parallelism for Gene-Expression Quantile Normalization

GPU-BSM: A GPU-Based Tool to Map Bisulfite-Treated Reads

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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