high performance computing on graphics processing units: hgpu.org

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A CUDA Monte Carlo simulator for radiation therapy dosimetry based on Geant4

N. Henderson, K. Murakami, K. Amako, M. Asai, T. Aso, A. Dotti, A. Kimura, M. Gerritsen, H. Kurashige, J. Perl, T. Sasaki

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Tags: Algorithms, CUDA, nVidia, Physics, Radiotherapy, Tesla K20

January 30, 2014 by hgpu

On the Programmability and Performance of Heterogeneous Platforms

Konstantinos Krommydas, Thomas R.W. Scogland, Wu-chun Feng

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Tags: Computer science, CUDA, Heterogeneous systems, Intel Xeon Phi, N-body simulation, nVidia, OpenACC, Optimization, Tesla K20

January 29, 2014 by hgpu

Optimizing Stencil Computations for NVIDIA Kepler GPUs

Naoya Maruyama, Takayuki Aoki

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Tags: Computer science, CUDA, Numerical Analysis, nVidia, Package, Tesla K20, Tesla M2075

January 26, 2014 by hgpu

GPU acceleration of Newton’s method for large systems of polynomial equations in double double and quad double arithmetic

Jan Verschelde, Xiangcheng Yu

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Tags: Algorithms, CUDA, Extended precision, Linear Algebra, Mathematics, nVidia, Tesla C2050, Tesla K20

January 26, 2014 by hgpu

A High-productivity Framework for Multi-GPU computation of Mesh-based applications

Takashi Shimokawabe, Takayuki Aoki, Naoyuki Onodera

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Tags: Computer science, CUDA, Diffusion equation, MPI, nVidia, Tesla K20

January 25, 2014 by hgpu

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

Lorenzo Rovigatti, Petr Sulc, Istvan Z. Reguly, Flavio Romano

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, Package, Physics, Soft Condensed Matter, Tesla C2070, Tesla K10, Tesla K20

January 23, 2014 by hgpu

GPU Accelerated Vessel Segmentation Using Laplacian Eigenmaps

Lin Cheng, Hyunsu Cho, Peter A. Yoon

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Tags: CUDA, Image processing, nVidia, Package, Tesla K20

January 17, 2014 by hgpu

A hierarchically blocked Jacobi SVD algorithm for single and multiple graphics processing units

Vedran Novakovic

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Tags: Algorithms, Computer science, CUDA, Numerical Analysis, nVidia, Tesla C2070, Tesla K20, Tesla S2050

January 14, 2014 by hgpu

Towards Portable Performance for Explicit Hydrodynamics Codes

A. C. Mallinson, D. A. Beckingsale, W. P. Gaudin, J. A. Herdman, S. A. Jarvis

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Tags: APU, ATI, ATI FirePro V7800, Computer science, Fluid dynamics, MPI, nVidia, OpenCL, Package, Performance, Tesla K20

January 14, 2014 by hgpu

A tool for mapping Single Nucleotide Polymorphisms using Graphics Processing Units

Andrea Manconi, Alessandro Orro, Emanuele Manca, Giuliano Armano, Luciano Milanesi

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 480, Package, Smith-Waterman algorithm, Tesla K20

January 12, 2014 by hgpu

GPU-Accelerated parallel FDTD on Distributed Heterogeneous Platform

Ronglin Jiang, Shugang Jiang, Yu Zhang, Ying Xu, Lei Xu, Dandan Zhang

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Tags: CUDA, Electrodynamics, FDTD, Finite-difference time-domain, Fortran, Heterogeneous systems, MPI, nVidia, Tesla K20

January 12, 2014 by hgpu

Saddle Vertex Graph (SVG): A Novel Solution to the Discrete Geodesic Problem

Xiang Ying, Xiaoning Wang, Ying He

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Tags: 3D Graphics and Realism, Algorithms, Computer science, CUDA, Geodesic Distances, nVidia, Tesla K20, Tessellation

January 10, 2014 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

A CUDA Monte Carlo simulator for radiation therapy dosimetry based on Geant4

On the Programmability and Performance of Heterogeneous Platforms

Optimizing Stencil Computations for NVIDIA Kepler GPUs

GPU acceleration of Newton’s method for large systems of polynomial equations in double double and quad double arithmetic

A High-productivity Framework for Multi-GPU computation of Mesh-based applications

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

GPU Accelerated Vessel Segmentation Using Laplacian Eigenmaps

A hierarchically blocked Jacobi SVD algorithm for single and multiple graphics processing units

Towards Portable Performance for Explicit Hydrodynamics Codes

A tool for mapping Single Nucleotide Polymorphisms using Graphics Processing Units

GPU-Accelerated parallel FDTD on Distributed Heterogeneous Platform

Saddle Vertex Graph (SVG): A Novel Solution to the Discrete Geodesic Problem

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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