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Acceleration of the Smith-Waterman Algorithm using Single and Multiple Graphics Processors

Ali Khajeh-Saeed, Stephen Poole, J. Blair Perot

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce 9800 GT, nVidia GeForce 9800 GTX, nVidia GeForce GTX 295, Sequence matching, Smith-Waterman algorithm

November 18, 2010 by hgpu

Bayesian real-time perception algorithms on GPU

Joao Ferreira, Jorge Lobo, Jorge Dias

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce 9800 GTX

November 8, 2010 by hgpu

StoreGPU: exploiting graphics processing units to accelerate distributed storage systems

Samer Al-Kiswany, Abdullah Gharaibeh, Elizeu Santos-Neto, George Yuan, Matei Ripeanu

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce 8600 GTS, nVidia GeForce 9800 GTX, Package, Storage system

November 6, 2010 by hgpu

Realistic real-time sound re-synthesis and processing for interactive virtual worlds

Fernando Trebien, Manuel Oliveira

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Tags: CUDA, nVidia, nVidia GeForce 9800 GTX, Signal processing

November 5, 2010 by hgpu

Benchmarking GPUs to tune dense linear algebra

Vasily Volkov, James W. Demmel

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Tags: BLAS, Computer science, CUDA, Linear Algebra, nVidia, nVidia GeForce 8600 GTS, nVidia GeForce 8800 GTX, nVidia GeForce 9800 GTX, nVidia GeForce GTX 280

November 4, 2010 by hgpu

Fast calculation of HELAS amplitudes using graphics processing unit (GPU)

K. Hagiwara, J. Kanzaki, N. Okamura, D. Rainwater, T. Stelzer

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Tags: Computational Physics, CUDA, High Energy Physics - Experiment, High Energy Physics - Phenomenology, nVidia, nVidia GeForce 8800 M GTS, nVidia GeForce 9800 GTX, nVidia GeForce GTX 280, Physics

October 27, 2010 by hgpu

Efficient GPU-Based Texture Interpolation using Uniform B-Splines

Daniel Ruijters,Bart ter Haar Romeny,Paul Suetens

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Tags: Computer science, CUDA, Image processing, nVidia, nVidia GeForce 9800 GTX, Package

October 27, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Acceleration of the Smith-Waterman Algorithm using Single and Multiple Graphics Processors

Bayesian real-time perception algorithms on GPU

StoreGPU: exploiting graphics processing units to accelerate distributed storage systems

Realistic real-time sound re-synthesis and processing for interactive virtual worlds

Benchmarking GPUs to tune dense linear algebra

Fast calculation of HELAS amplitudes using graphics processing unit (GPU)

Efficient GPU-Based Texture Interpolation using Uniform B-Splines

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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