high performance computing on graphics processing units: hgpu.org

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GSNP: A DNA Single-Nucleotide Polymorphism Detection System with GPU Acceleration

Mian Lu, Jiuxin Zhao, Qiong Luo, Bingqiang Wang, Shaohua Fu, Zhe Lin

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Tags: Bioinformatics, Biology, Compression, nVidia, Package, Sorting, Tesla M2050

November 12, 2011 by hgpu

Multithread Content Based File Chunking System in CPU-GPGPU Heterogeneous Architecture

Zhi Tang, Youjip Won

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 460

November 12, 2011 by hgpu

Building a Real-Time Multi-GPU Platform: Robust Real-Time Interrupt Handling Despite Closed-Source Drivers

Glenn A. Elliott, James H. Anderson

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Tags: Computer science, CUDA, GPU cluster, nVidia, nVidia GeForce GTX 470, Package, Performance

November 11, 2011 by hgpu

Many-body quantum chemistry on graphics processing units

A. Eugene DePrince III, Jeff R. Hammond, Stephen K. Gray

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Tags: Algorithms, Chemistry, Computational chemistry, CUDA, Heterogeneous systems, Matrix multiplication, Molecular modeling, nVidia, Tesla C2050

November 11, 2011 by hgpu

Accelerating the Smoldyn Spatial Stochastic Biochemical Reaction Network Simulator Using GPUs

Denis V. Gladkov, Samuel Alberts, Roshan M. D'Souza, Steven Andrews

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Tags: Algorithms, Biochemistry, Computational Complexity, Computer science, CUDA, nVidia, Tesla C2050

November 11, 2011 by hgpu

Improving GPU Performance via Large Warps and Two-Level Warp Scheduling

Veynu Narasiman, Chang Joo Lee, Michael Shebanow, Rustam Miftakhutdinov, Onur Mutlu, Yale N. Patt

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Tags: Computer science, CUDA, nVidia, Performance, Warp level parallelism

November 11, 2011 by hgpu

An Interest Point Based Illumination Condition Matching Approach to Photometric Registration Within Augmented Reality Worlds

Mark Bingham

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Tags: Algorithms, Computational Complexity, Computer science, nVidia, nVidia GeForce GTX 295, Thesis, Virtual reality

November 11, 2011 by hgpu

Synthetic Aperture Beamformation using the GPU

Jens Munk Hansen, Dana Schaa, Jorgen Arendt Jensen

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Tags: ATI, ATI Radeon HD 5870, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, nVidia GeForce GTX 580, OpenCL, Signal processing, Ultrasound

November 11, 2011 by hgpu

Run, Stencil, Run! – A Comparison of Modern Parallel Programming Paradigms

Helmar Burkhart, Matthias Christen, Max Rietmann, Madan Sathe, Olaf Schenk

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Tags: Benchmarking, Computer science, CUDA, MPI, nVidia, OpenMP, Tesla C2050

November 10, 2011 by hgpu

Generation of planar radiographs from 3D anatomical models using the GPU

Andre dos Santos Cardoso

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Tags: Algorithms, Benchmarking, CUDA, Data parallelism, Image processing, Image registration, Medicine, nVidia, nVidia GeForce GT 240, Optimization, Thesis

November 10, 2011 by hgpu

cudaBayesreg: Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis

Adelino R. Ferreira da Silva

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Tags: Bayesian, Computer science, CUDA, Magnetic resonance imaging, MRI, nVidia, nVidia GeForce 8400 M GS, Package

November 10, 2011 by hgpu

Fast Hair Simulation and Rendering Using CUDA and OpenGL

Steve Lesser

Tags: 3D Graphics and Realism, Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 460, OpenGL, Rendering

November 10, 2011 by hgpu

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Dr. Kernel: Reinforcement Learning Done Right for Triton Kernel Generations

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

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high performance computing on graphics processing units: hgpu.org

GSNP: A DNA Single-Nucleotide Polymorphism Detection System with GPU Acceleration

Multithread Content Based File Chunking System in CPU-GPGPU Heterogeneous Architecture

Building a Real-Time Multi-GPU Platform: Robust Real-Time Interrupt Handling Despite Closed-Source Drivers

Many-body quantum chemistry on graphics processing units

Accelerating the Smoldyn Spatial Stochastic Biochemical Reaction Network Simulator Using GPUs

Improving GPU Performance via Large Warps and Two-Level Warp Scheduling

An Interest Point Based Illumination Condition Matching Approach to Photometric Registration Within Augmented Reality Worlds

Synthetic Aperture Beamformation using the GPU

Run, Stencil, Run! – A Comparison of Modern Parallel Programming Paradigms

Generation of planar radiographs from 3D anatomical models using the GPU

cudaBayesreg: Parallel Implementation of a Bayesian Multilevel Model for fMRI Data Analysis

Fast Hair Simulation and Rendering Using CUDA and OpenGL

Recent source codes

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Vortex-Optimized Light-weight Toolchain (VOLT)

SciDef: Automated Definition Extraction from Scientific Literature

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

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