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GPU-Accelerated Drug Discovery with Docking on the Summit Supercomputer: Porting, Optimization, and Application to COVID-19 Research

Scott LeGrand, Aaron Scheinberg, Andreas F. Tillack, Mathialakan Thavappiragasam, Josh V. Vermaas, Rupesh Agarwal, Jeff Larkin, Duncan Poole, Diogo Santos-Martins, Leonardo Solis-Vasquez, Andreas Koch, Stefano Forli, Oscar Hernandez, Jeremy C. Smith, Ada Sedova

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Tags: Biology, Biomolecules, Computational biology, CUDA, molecular docking, nVidia, nVidia DGX-2, nVidia GeForce RTX 2080 Ti, OpenCL, supercomputer, Tesla V100

July 12, 2020 by hgpu

Megatron-LM: Training Multi-Billion Parameter Language Models Using Model Parallelism

Mohammad Shoeybi, Mostofa Patwary, Raul Puri, Patrick LeGresley, Jared Casper, Bryan Catanzaro

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Tags: Computer science, Deep learning, NLP, nVidia, nVidia DGX-2, Package, Tesla V100

September 22, 2019 by hgpu

Performance Analysis of Deep Learning Workloads on Leading-edge Systems

Yihui Ren, Shinjae Yoo, Adolfy Hoisie

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Tags: Cloud, Computer science, Computer vision, CUDA, Deep learning, Machine learning, NLP, nVidia, nVidia DGX-2, nVidia GeForce RTX 2080 Ti, Performance, Tesla V100

May 23, 2019 by hgpu

GPU Mekong

Automated Partitioning of Data-Parallel Kernels using Polyhedral Compilation

GE-SpMM: General-purpose Sparse Matrix-Matrix Multiplication on GPUs for Graph Neural Networks

sycl-bench: SYCL Benchmark Suite

SYCL-Bench: A Versatile Cross-Platform Benchmark Suite for Heterogeneous Computing

Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing

OpenABLext: An extension to OpenABL, a framework to generate high- performance code for agent-based simulations

OpenABLext: An automatic code generation framework for agent-based simulations on CPU-GPU-FPGA heterogeneous platforms

SOFF: SNU OpenCL Framework for FPGAs

SOFF: An OpenCL High-Level Synthesis Framework for FPGAs

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2020

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The Fifth International Workshop on GPU Computing and AI (GCA), 2020

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Shenzhen, China

2nd International Conference on Frontiers of Intelligent Manufacturing and Automation (CFIMA’21), 2021

2020

December

14-16

Bangkok, Thailand

International Conference on Cyber Physical Systems and IoT (CPSIOT’20), 2020

2020

December

14-16

Bangkok, Thailand

International Conference on Wireless Networks and Embedded Systems (ICWNES’20), 2020

2020

December

14-16

Bangkok, Thailand

International Joint Conference on Signals, Systems and Computers (CSSC’20), 2020

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high performance computing on graphics processing units: hgpu.org

GPU-Accelerated Drug Discovery with Docking on the Summit Supercomputer: Porting, Optimization, and Application to COVID-19 Research

Megatron-LM: Training Multi-Billion Parameter Language Models Using Model Parallelism

Recent source codes

GPU Mekong

GE-SpMM: General-purpose Sparse Matrix-Matrix Multiplication on GPUs for Graph Neural Networks

sycl-bench: SYCL Benchmark Suite

Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing

Ginkgo: a high-performance linear algebra library for manycore systems

GROMACS with CUDA-aware MPI direct GPU communication support

Rodinia_SYCL: The Rodinia Benchmark Suite in SYCL

Neural Architecture Search Without Training

OpenABLext: An extension to OpenABL, a framework to generate high- performance code for agent-based simulations

SOFF: SNU OpenCL Framework for FPGAs

Most viewed papers (last 30 days)

Featured events

The Fifth International Workshop on GPU Computing and AI (GCA), 2020

2nd International Conference on Frontiers of Intelligent Manufacturing and Automation (CFIMA’21), 2021

International Conference on Cyber Physical Systems and IoT (CPSIOT’20), 2020

International Conference on Wireless Networks and Embedded Systems (ICWNES’20), 2020

International Joint Conference on Signals, Systems and Computers (CSSC’20), 2020