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permGPU: Using graphics processing units in RNA microarray association studies

Ivo Shterev, Sin H. Jung, Stephen George, Kouros Owzar

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Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 280, Package, RNA

November 17, 2010 by hgpu

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

Stanimire Tomov, Rajib Nath, Jack Dongarra

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Tags: BLAS, Computer science, CUBLAS, CUDA, Linear Algebra, nVidia, nVidia GeForce GTX 280, Package

November 17, 2010 by hgpu

Graphic processors to speed-up simulations for the design of high performance solar receptors

Sylvain Collange, Marc Daumas, David Defour

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Tags: ATI, ATI Radeon RX 1800 XL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Optics, Package, Physics

November 13, 2010 by hgpu

A multiphysics and multiscale software environment for modeling astrophysical systems

Simon Portegies Zwart, Steve McMillan, Stefan Harfst, Derek Groen, Michiko Fujii, Breanndan O Nuallain, Evert Glebbeek, Douglas Heggie, James Lombardi, Piet Hut, Vangelis Angelou, Sambaran Banerjee, Houria Belkus, Tassos Fragos, John Fregeau, Evghenii Gaburov, Rob Izzard, Mario Juric, Stephen Justham, Andrea Sottoriva, Peter Teuben, Joris van Bever, Ofer Yaron, Marcel Zemp

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Tags: Astrophysics, N-body simulation, nVidia, Package

November 13, 2010 by hgpu

CUDAEASY – a GPU Accelerated Cosmological Lattice Program

Jani Sainio

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Tags: Astrophysics, Computational Physics, Cosmology and Extragalactic Astrophysics, CUDA, High Energy Physics - Phenomenology, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 260, Package

November 13, 2010 by hgpu

Air pollution modelling using a graphics processing unit with CUDA

Ferenc Molnar Jr., Tamas Szakaly, Robert Meszaros, Istvan Lagzi

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Tags: Computational Physics, CUDA, Earth and Space Sciences, Medical Physics, nVidia, nVidia GeForce 8800 GTS, nVidia GeForce 8800 GTX, Package, Physics

November 13, 2010 by hgpu

Real-time digital holographic microscopy observable in multi-view and multi-resolution

Tomoyoshi Shimobaba, Nobuyuki Masuda, Yasuyuki Ichihashi, Tomoyoshi Ito

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Tags: Biological Physics, Computational Physics, Computer holography, CUDA, nVidia, nVidia GeForce GTX 295, Optics, Package, Physics

November 12, 2010 by hgpu

Exact Sparse Matrix-Vector Multiplication on GPU’s and Multicore Architectures

Brice Boyer, Jean-Guillaume Dumas, Pascal Giorgi

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Tags: Computer science, CUDA, Mathematical Software, nVidia, nVidia GeForce GTX 280, OpenMP, Package, Sparse matrix, Symbolic Computation

November 11, 2010 by hgpu

MYRIAD: A new N-body code for simulations of Star Clusters

Simos Konstantinidis, Kostas D. Kokkotas

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Tags: Astrophysics, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, Package, Tesla C1060

November 11, 2010 by hgpu

QYMSYM: A GPU-Accelerated Hybrid Symplectic Integrator That Permits Close Encounters

Alexander Moore, Alice C. Quillen

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Tags: Astrophysics, Celestial mechanics, CUDA, Earth and Planetary Astrophysics, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package

November 10, 2010 by hgpu

General purpose Molecular Dynamics Simulations on GPUs: Issues of Pair Forces and Scaling to large Clusters

Christian Trott, Lars Winterfeld

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Tags: Computational Physics, Condensed matter, CUDA, GPU cluster, Materials Science, Molecular dynamics, MPI, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 295, Package, Performance, Physics, Tesla C1060, Tesla S1070

November 9, 2010 by hgpu

SU(2) Lattice QCD Simulations on Fermi GPUs

Nuno Cardoso, Pedro Bicudo

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, Monte Carlo simulation, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 480, Package, Physics

November 9, 2010 by hgpu

CuPBoP-AMD: Extending CUDA to AMD Platforms

CuPBoP: Making CUDA a Portable Language

Adopter: Automated Deep Learning Optimization via DSL-based Source Code Transformation

Automated Deep Learning Optimization via DSL-Based Source Code Transformation

ROCm's implementation of Gromacs

GROMACS on AMD GPU-Based HPC Platforms: Using SYCL for Performance and Portability

Code examples for paper on SYCL backend of Kokkos - IWOCL 2024

Experiences with implementing Kokkos’ SYCL backend

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

GPU plugin for PySCF

Python-Based Quantum Chemistry Calculations with GPU Acceleration

QArray

QArray: a GPU-accelerated constant capacitance model simulator for large quantum dot arrays

Celerity: High-level C++ for Accelerator Clusters

Balancing Tracking Granularity and Parallelism in Many-Task Systems: The Horizons Approach

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

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