high performance computing on graphics processing units: hgpu.org

RUMD: A general purpose molecular dynamics package optimized to utilize GPU hardware down to a few thousand particles

Nicholas P. Bailey, Trond S. Ingebrigtsen, Jesper Schmidt Hansen, Arno A. Veldhorst, Lasse Bohling, Claire A. Lemarchand, Andreas E. Olsen, Andreas K. Bacher, Heine Larsen, Jeppe C. Dyre, Thomas B. Schroder

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 780 Ti, Package, Physics, Python

June 17, 2015 by hgpu

Poisson-Boltzmann model for protein-surface electrostatic interactions and grid-convergence study using the PyGBe code

Christopher D. Cooper, Lorena A. Barba

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Tags: Biomolecules, Boltzmann equation, Computational Physics, CUDA, Electrostatics, nVidia, Package, Physics, Poisson Boltzmann, Python, Tesla C2075

June 14, 2015 by hgpu

Lensed: a code for the forward reconstruction of lenses and sources from strong lensing observations

Nicolas Tessore, Fabio Bellagamba, R. Benton Metcalf

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Tags: Astrophysics, OpenCL, Package, Rendering

May 29, 2015 by hgpu

GPU-accelerated micromagnetic simulations using cloud computing

C. L. Jermain, G. E. Rowlands, R. A. Buhrman, D. C. Ralph

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Tags: Cloud, Computational Physics, CUDA, nVidia, nVidia GeForce GTX 770, nVidia GRID K520, Package, Physics, Python

May 10, 2015 by hgpu

PyTransit: Fast and Easy Exoplanet Transit Modelling in Python

Hannu Parviainen

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Tags: Astrophysics, Earth and Planetary Astrophysics, OpenCL, Package, Python

May 3, 2015 by hgpu

NBODY6++GPU: Ready for the gravitational million-body problem

Long Wang, Rainer Spurzem, Sverre Aarseth, Keigo Nitadori, Peter Berczik, M.B.N. Kouwenhoven, Thorsten Naab

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, nVidia, Package, Tesla K20

April 17, 2015 by hgpu

GPU Kernels for High-Speed 4-Bit Astrophysical Data Processing

Peter Klages, Kevin Bandura, Nolan Denman, Andre Recnik, Jonathan Sievers, Keith Vanderlinde

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Tags: AMD Radeon R9 280X, Astrophysics, ATI, Instrumentation and Methods for Astrophysics, OpenCL, Package

March 23, 2015 by hgpu

HELIOS-K: An Ultrafast, Open-source Opacity Calculator for Radiative Transfer

Simon L. Grimm, Kevin Heng

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Tags: Astrophysics, CUDA, Earth and Planetary Astrophysics, nVidia, Package, Tesla K20

March 14, 2015 by hgpu

Montblanc: GPU accelerated Radio Interferometer Measurement Equations in support of Bayesian Inference for Radio Observations

Simon Perkins, Patrick Maraism, Jonathan Zwart, Iniyan Natarajan, Oleg Smirnov

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Tags: Astrophysics, Bayesian, Computer science, CUDA, Instrumentation and Methods for Astrophysics, nVidia, Package, Python, Tesla K40

February 2, 2015 by hgpu

Digital Signal Processing using Stream High Performance Computing: A 512-input Broadband Correlator for Radio Astronomy

J. Kocz, L.J Greenhill, B.R. Barsdell, D. Price, G. Bernardi, S. Bourke, M.A. Clark, J. Craig, M. Dexter, J. Dowell, T. Eftekhari, S. Ellingson, G. Hallinan, J. Hartman, A. Jameson, D. MacMahon, G. Taylor, F. Schinzel, D. Werthimer

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Tags: Astrophysics, CUDA, FPGA, GPU cluster, Heterogeneous systems, Instrumentation and Methods for Astrophysics, nVidia, Package, Signal processing, Tesla K20

January 10, 2015 by hgpu

PyFAI: a Python library for high performance azimuthal integration on GPU

Jerome Kieffer, Giannis Ashiotis

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Tags: Astrophysics, ATI, ATI FirePro V7800, Instrumentation and Methods for Astrophysics, Intel Xeon Phi, nVidia, nVidia GeForce GTX 750 Ti, OpenCL, Package, PyOpenCL, Python, Tesla K20

December 22, 2014 by hgpu

cuLGT: Lattice Gauge Fixing on GPUs

Hannes Vogt, Mario Schrock

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, nVidia, nVidia GeForce GTX 580, nVidia GeForce GTX 680, nVidia GeForce GTX Titan, Package, Physics, Tesla K20

December 12, 2014 by hgpu

high performance computing on graphics processing units: hgpu.org

Packages

RUMD: A general purpose molecular dynamics package optimized to utilize GPU hardware down to a few thousand particles

Poisson-Boltzmann model for protein-surface electrostatic interactions and grid-convergence study using the PyGBe code

Lensed: a code for the forward reconstruction of lenses and sources from strong lensing observations

PyTransit: Fast and Easy Exoplanet Transit Modelling in Python

NBODY6++GPU: Ready for the gravitational million-body problem

GPU Kernels for High-Speed 4-Bit Astrophysical Data Processing

HELIOS-K: An Ultrafast, Open-source Opacity Calculator for Radiative Transfer

Montblanc: GPU accelerated Radio Interferometer Measurement Equations in support of Bayesian Inference for Radio Observations

Digital Signal Processing using Stream High Performance Computing: A 512-input Broadband Correlator for Radio Astronomy

PyFAI: a Python library for high performance azimuthal integration on GPU

cuLGT: Lattice Gauge Fixing on GPUs

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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