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A Domain Specific Language for Performance Portable Molecular Dynamics Algorithms

William R. Saunders, James Grant, Eike H. Muller

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Tags: Algorithms, Biology, Chemistry, Code generation, Computer science, CUDA, Differential equations, DSL, Molecular dynamics, nVidia, Package, Partial differential equations, PDEs, Physics, Python, Tesla K20

April 15, 2017 by hgpu

Acceleration of Linear Finite-Difference Poisson-Boltzmann Methods on Graphics Processing Units

Ruxi Qi, Wesley M. Botello-Smith, Ray Luo

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Tags: Biomolecules, Biophysics, Boltzmann equation, Computational Physics, CUBLAS, CUDA, Electrostatics, Molecular simulation, nVidia, nVidia GeForce GTX 980 Ti, Physics, Poisson Boltzmann

April 11, 2017 by hgpu

Parallelized Vlasov-Fokker-Planck solver for desktop personal computers

Patrik Schonfeldt, Miriam Brosi, Markus Schwarz, Johannes L. Steinmann, Anke-Susanne Muller

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Tags: AMD Radeon R9 290, ATI, OpenCL, Package, Physics

March 28, 2017 by hgpu

GPU accelerated population annealing algorithm

Lev Yu. Barash, Martin Weigel, Michal Borovsky, Wolfhard Janke, Lev N. Shchur

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Tags: Algorithms, CUDA, Ising model, Monte Carlo simulation, nVidia, Package, Physics, Tesla K80

March 14, 2017 by hgpu

Model-independent partial wave analysis using a massively-parallel fitting framework

Liang Sun, Rafael Aoude, Alberto Correa Dos Reis, Michael David Sokoloff

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Tags: Algorithms, CUDA, High Energy Physics - Experiment, nVidia, OpenMP, Package, Physics, Tesla K40

March 14, 2017 by hgpu

Key Reconciliation with Low-Density Parity-Check Codes for Long-Distance Quantum Cryptography

Mario Milicevic, Chen Feng, Lei M. Zhang, P. Glenn Gulak

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Tags: CUDA, nVidia, nVidia GeForce GTX 1080, Parity-check codes, Physics, Quantum Physics, Security

February 28, 2017 by hgpu

MCBooster: a library for fast Monte Carlo generation of phase-space decays on massively parallel platforms

A. A. Alves Jr, M. D. Sokoloff

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Tags: Computational Physics, CUDA, High Energy Physics - Experiment, High Energy Physics - Phenomenology, Intel Xeon Phi, Monte Carlo simulation, nVidia, nVidia GeForce GTX 970, nVidia GeForce GTX Titan Z, nVidia Quadro K 2200, OpenMP, Package, Physics, Tesla K40

February 22, 2017 by hgpu

cellGPU: massively parallel simulations of dynamic vertex models

Daniel M. Sussman

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Tags: Biological Physics, CUDA, nVidia, Package, Physics, Tesla K40

February 14, 2017 by hgpu

Acceleration of low-latency gravitational wave searches using Maxwell-microarchitecture GPUs

Xiangyu Guo, Qi Chu, Shin Kee Chung, Zhihui Du, Linqing Wen

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Tags: Astrophysics, CUDA, Filtering, Gravitation, Gravitational waves, nVidia, nVidia GeForce GTX 980

February 10, 2017 by hgpu

Machines and Algorithms

Peter A Boyle

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Tags: Algorithms, Computational Physics, CUDA, HEP, High Energy Physics - Lattice, Intel Xeon Phi, nVidia, Physics, QCD, Review

February 7, 2017 by hgpu

Recurrent Neural Networks for anomaly detection in the Post-Mortem time series of LHC superconducting magnets

Maciej Wielgosz, Andrzej Skoczen, Matej Mertik

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Tags: CUDA, Deep learning, Instrumentation and Detectors, Keras, LSTM, Machine learning, Neural networks, nVidia, Physics, RNN, Tesla K80, Theano

February 7, 2017 by hgpu

Introduction to the Special Issue on Digital Signal Processing in Radio Astronomy

Danny C. Price, Jonathon Kocz, Matthew Bailes, Lincoln J. Greenhill

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Tags: Astrophysics, CUDA, DSP, FPGA, nVidia, Overview, Signal processing

February 7, 2017 by hgpu

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OCLADock - OpenCL Accelerated Molecular Docking

A Case Study in Using OpenCL on FPGAs: Creating an Open-Source Accelerator of the AutoDock Molecular Docking Software

sentiment-discovery: Unsupervised Language Modeling at scale for robust sentiment classification

Large Scale Language Modeling: Converging on 40GB of Text in Four Hours

Parallax: A Tool for Automatic Parallelization of Deep Learning Training in Distributed Multi-GPU Environments

Parallax: Automatic Data-Parallel Training of Deep Neural Networks

OpenCLIPER: an OpenCL-based C++ Framework for Overhead-Reduced Medical Image processing and Reconstruction on heterogeneous Devices

OpenCLIPER: an OpenCL-based C++ Framework for Overhead-Reduced Medical Image Processing and Reconstruction on Heterogeneous Devices

Spatial: Specify Parameterized Accelerators Through Inordinately Abstract Language

Spatial: A Language and Compiler for Application Accelerators

cuPentBatch: A batched pentadiagonal solver for NVIDIA GPUs

cuPentBatch – A batched pentadiagonal solver for NVIDIA GPUs

LeFlow: Enabling Flexible FPGA High-Level Synthesis of Tensorflow Deep Neural Networks

CloudCL: Single-Paradigm Distributed Heterogeneous Computing for Cloud Infrastructures

Calamari: OCR Engine based on OCRopy and Kraken

Calamari – A High-Performance Tensorflow-based Deep Learning Package for Optical Character Recognition

FluidFFT: efficient and easy Fast Fourier Transform for Python

FluidFFT: common API (C++ and Python) for Fast Fourier Transform HPC libraries

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Guangzhou, China

The 3rd International Conference on Computer Systems and Communication Technology (ICCSCT), 2018

2018

November

02-04

Academic Exchange Center in Ocean University of China, Qingdao, China

The 4th International Conference on Communication and Information Processing (ICCIP), 2018

2018

November

27-30

Hida Takayama, Japan

The Third International Workshop on GPU Computing and AI (GCA), 2018

2018

September

19-21

Nagoya University, Japan

The 5th International Conference on Power and Energy Systems Engineering (CPESE), 2018

2018

September

22-24

MediaCityUK, Salford Quays, Greater Manchester, England

The 10th International Conference on Information Management and Engineering (ICIME), 2018

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high performance computing on graphics processing units: hgpu.org

Applications

A Domain Specific Language for Performance Portable Molecular Dynamics Algorithms

Acceleration of Linear Finite-Difference Poisson-Boltzmann Methods on Graphics Processing Units

Parallelized Vlasov-Fokker-Planck solver for desktop personal computers

GPU accelerated population annealing algorithm

Model-independent partial wave analysis using a massively-parallel fitting framework

Key Reconciliation with Low-Density Parity-Check Codes for Long-Distance Quantum Cryptography

MCBooster: a library for fast Monte Carlo generation of phase-space decays on massively parallel platforms

cellGPU: massively parallel simulations of dynamic vertex models

Acceleration of low-latency gravitational wave searches using Maxwell-microarchitecture GPUs

Machines and Algorithms

Recurrent Neural Networks for anomaly detection in the Post-Mortem time series of LHC superconducting magnets

Introduction to the Special Issue on Digital Signal Processing in Radio Astronomy

Recent source codes

OCLADock - OpenCL Accelerated Molecular Docking

sentiment-discovery: Unsupervised Language Modeling at scale for robust sentiment classification

Parallax: A Tool for Automatic Parallelization of Deep Learning Training in Distributed Multi-GPU Environments

OpenCLIPER: an OpenCL-based C++ Framework for Overhead-Reduced Medical Image processing and Reconstruction on heterogeneous Devices

Spatial: Specify Parameterized Accelerators Through Inordinately Abstract Language

cuPentBatch: A batched pentadiagonal solver for NVIDIA GPUs

LeFlow: Enabling Flexible FPGA High-Level Synthesis of Tensorflow Deep Neural Networks

CloudCL: Single-Paradigm Distributed Heterogeneous Computing for Cloud Infrastructures

Calamari: OCR Engine based on OCRopy and Kraken

FluidFFT: efficient and easy Fast Fourier Transform for Python

Most viewed papers (last 30 days)

Featured events

The 3rd International Conference on Computer Systems and Communication Technology (ICCSCT), 2018

The 4th International Conference on Communication and Information Processing (ICCIP), 2018

The Third International Workshop on GPU Computing and AI (GCA), 2018

The 5th International Conference on Power and Energy Systems Engineering (CPESE), 2018

The 10th International Conference on Information Management and Engineering (ICIME), 2018