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Sequence Homology Search using Fine-Grained Cycle Sharing of Idle GPUs

Fumihiko Ino, Yuma Munekawa, Kenichi Hagihara

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Tags: Algorithms, Computer science, CUDA, Distributed computing, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 285, Search, Smith-Waterman algorithm

December 4, 2011 by hgpu

kNN Query Processing in Metric Spaces Using GPUs

Ricardo J. Barrientos, Jose I. Gomez, Christian Tenllado, Manuel Prieto Matias, Mauricio Marin

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Tags: Algorithms, Biology, Computational biology, CUDA, Databases, Information Retrieval, nVidia, nVidia GeForce GTX 280

December 4, 2011 by hgpu

Computing Strongly Connected Components in Parallel on CUDA

Jiri Barnat, Petr Bauch, Lubos Brim, Milan Ceska

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Tags: Algorithms, Computer science, CUDA, Graph theory, nVidia, nVidia GeForce GTX 480

December 4, 2011 by hgpu

Implementing CFD (Computational Fluid Dynamics) in OpenCL for Building Simulation

Yue Wang, Ali Malkawi, Yun Yi

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Source codes

Tags: Fluid dynamics, nVidia, nVidia GeForce 9400 M, nVidia GeForce 9800 GTX, OpenCL, Package

December 4, 2011 by hgpu

Global Point Mascon Models for Simple, Accurate and Parallel Geopotential Computation

Ryan P. Russell, Nitin Arora

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Tags: Earth and Space Sciences, Geoscience, nVidia, nVidia GeForce GTX 465, Tesla C2050

December 4, 2011 by hgpu

Multi-Directional Optimisation on the GPU

Niels Stchedroff

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Tags: Algorithms, CUDA, Finance, nVidia, Tesla C1060

December 4, 2011 by hgpu

Multi-GPU Load Balancing for In-situ Visualization

R. Hagan, Y. Cao

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Tags: Computer science, CUDA, GPU cluster, N-body simulation, nVidia, nVidia GeForce GTX 295, Raytracing, Rendering, Visualization

December 4, 2011 by hgpu

Solving Rigid Multibody Physics Dynamics Using Proximal Point Functions on the GPU

Jeremy James Betz

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Tags: CUDA, nVidia, nVidia GeForce GTX 480, Physics, Thesis

December 4, 2011 by hgpu

Programming hybrid systems with implicit memory based synchronization

Jens Breitbart

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Tags: Algorithms, Computer science, CUDA, Hybrid computing, nVidia, nVidia GeForce GTX 480, Package, Tesla C2050

December 3, 2011 by hgpu

Computation of Large Covariance Matrices by SAMMY on Graphical Processing Units and Multicore CPUs

G. Arbanas, M.E. Dunn, D. Wiarda

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Tags: CUBLAS, CUDA, Heterogeneous systems, Linear Algebra, Matrix multiplication, Nuclear Experiment, nVidia, Physics, Tesla C2050

December 3, 2011 by hgpu

A Multi-View Stereo Implementation on Massively Parallel Hardware

Mate Beljan, Ronny Klowsky, Michael Goesele

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 8800 GT, Rendering, Tesla C870

December 3, 2011 by hgpu

Impact of Floating-Point Precision on Boundary Layer Instabilities Modeled on Fermi GPU

David A. Sanchez, David A. Yuen, Yujun Sun, Grady B. Wright

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Tags: CUBLAS, CUDA, Earth and Space Sciences, Geoscience, nVidia, Tesla C2070

December 3, 2011 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

Sequence Homology Search using Fine-Grained Cycle Sharing of Idle GPUs

kNN Query Processing in Metric Spaces Using GPUs

Computing Strongly Connected Components in Parallel on CUDA

Implementing CFD (Computational Fluid Dynamics) in OpenCL for Building Simulation

Global Point Mascon Models for Simple, Accurate and Parallel Geopotential Computation

Multi-Directional Optimisation on the GPU

Multi-GPU Load Balancing for In-situ Visualization

Solving Rigid Multibody Physics Dynamics Using Proximal Point Functions on the GPU

Programming hybrid systems with implicit memory based synchronization

Computation of Large Covariance Matrices by SAMMY on Graphical Processing Units and Multicore CPUs

A Multi-View Stereo Implementation on Massively Parallel Hardware

Impact of Floating-Point Precision on Boundary Layer Instabilities Modeled on Fermi GPU

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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