high performance computing on graphics processing units: hgpu.org

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hgpu.org » Applications

Split tiling for GPUs: automatic parallelization using trapezoidal tiles

Tobias Grosser, Albert Cohen, Paul H J Kelly, J. Ramanujam, P. Sadayappan, Sven Verdoolaege

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Tags: Code generation, Compilers, Computer science, CUDA, nVidia, nVidia GeForce GTX 470, nVidia Quadro NVS 5200 M, Package, Performance

April 29, 2013 by hgpu

High Performance Computing with GPUs

Nikita Vakulin, Riley Shaw, Timothy Livingston

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Tags: Computer science, CUDA, Differential equations, Finite element method, nVidia, Package

April 25, 2013 by hgpu

Directive-based Approach to Heterogeneous Computing

Ruyman Reyes Castro

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, OpenACC, OpenCL, Package, Python, Tesla C1060, Thesis

April 25, 2013 by hgpu

Solving Wave Equations on Unstructured Geometries

Andreas Klockner, Timothy Warburton, Jan S. Hesthaven

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Tags: Computer science, Mathematical Software, Numerical Analysis, nVidia, nVidia GeForce GTX 295, OpenCL, Package, Python, Wave equation

April 23, 2013 by hgpu

GPU Scripting and Code Generation with PyCUDA

Andreas Klockner, Nicolas Pinto, Bryan Catanzaro, Yunsup Lee, Paul Ivanov, Ahmed Fasih

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Tags: Code generation, Computer science, CUDA, nVidia, OpenCL, Package, PyOpenCL, Python

April 23, 2013 by hgpu

SW# – GPU enabled exact alignments on genome scale

Matija Korpar, Mile Sikic

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, nVidia GeForce GTX 560, nVidia GeForce GTX 570, nVidia GeForce GTX 690, Package, Sequence alignment, Smith-Waterman algorithm

April 23, 2013 by hgpu

Computer Simulation of Saturn’s Ring Structure

Cole Kendrick

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Tags: Astrophysics, ATI, ATI Radeon HD 5850, Gravitation, MPI, N-body simulation, nVidia, nVidia GeForce GTX 580, OpenCL, Package, Tesla S2050

April 21, 2013 by hgpu

MrBayes tgMC3: A Tight GPU Implementation of MrBayes

Cheng Ling, Tsuyoshi Hamada, Jianing Bai, Xianbin Li, Douglas Chesters, Weimin Zheng, Weifeng Shi

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Tags: Algorithms, Bayesian, Computer science, CUDA, nVidia, nVidia GeForce GTX 480, Package

April 18, 2013 by hgpu

B-Calm: an Open-Source Multi-Gpu-Based 3D-FDTD with Multi-Pole Dispersion for Plasmonics

Pierre Wahl, Dany-Sebastien Ly-Gagnon, Christof Debaes, Jurgen Van Erps, Nathalie Vermeulen, David A. B. Miller, Hugo Thienpont

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Tags: Algorithms, CUDA, Electrodynamics, FDTD, Finite-difference time-domain, nVidia, Package, Tesla C2075

April 13, 2013 by hgpu

CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

Yongchao Liu, Adrianto Wirawan, Bertil Schmidt

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 680, nVidia GeForce GTX 690, Package, PTX, Sequence alignment, Smith-Waterman algorithm

April 10, 2013 by hgpu

OpenCL Fast Fourier Transform

Ruobing Li

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Tags: Computer science, FFT, nVidia, OpenCL, Package, Tesla M2070

April 9, 2013 by hgpu

A Performance Comparison of Different Graphics Processing Units Running Direct N-Body Simulations

R. Capuzzo-Dolcettaa, M. Spera

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Tags: Astrophysics, ATI, ATI Radeon HD 6970, ATI Radeon HD 7870, ATI Radeon HD 7970, Gravitation, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, nVidia GeForce GTX 580, nVidia GeForce GTX 680, OpenCL, Package, Tesla C1060, Tesla C2050, Tesla K20

April 9, 2013 by hgpu

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Accelerating a Linear Programming Algorithm on AMD GPUs

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Towards Efficient and Practical GPU Multitasking in the Era of LLM

Bandicoot: C++ library for GPU accelerated linear algebra

Bandicoot: A Templated C++ Library for GPU Linear Algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

The Fused Kernel Library: A C++ API to Develop Highly-Efficient GPU Libraries

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

Block: Balance Loader of LLM Serving with Context, Knowledge and Predictive Scheduling

Block: Balancing Load in LLM Serving with Context, Knowledge and Predictive Scheduling

SIGMo: Scalable Isomorphism Graph Matching on GPUs

SIGMo: High-Throughput Batched Subgraph Isomorphism on GPUs for Molecular Matching

DGEMM without FP64 Arithmetic - using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

DGEMM without FP64 Arithmetic – using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

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high performance computing on graphics processing units: hgpu.org

Applications

Split tiling for GPUs: automatic parallelization using trapezoidal tiles

High Performance Computing with GPUs

Directive-based Approach to Heterogeneous Computing

Solving Wave Equations on Unstructured Geometries

GPU Scripting and Code Generation with PyCUDA

SW# – GPU enabled exact alignments on genome scale

Computer Simulation of Saturn’s Ring Structure

MrBayes tgMC3: A Tight GPU Implementation of MrBayes

B-Calm: an Open-Source Multi-Gpu-Based 3D-FDTD with Multi-Pole Dispersion for Plasmonics

CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

OpenCL Fast Fourier Transform

A Performance Comparison of Different Graphics Processing Units Running Direct N-Body Simulations

Recent source codes

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Bandicoot: C++ library for GPU accelerated linear algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

Block: Balance Loader of LLM Serving with Context, Knowledge and Predictive Scheduling

SIGMo: Scalable Isomorphism Graph Matching on GPUs

DGEMM without FP64 Arithmetic - using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

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