high performance computing on graphics processing units: hgpu.org

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Synergistic execution of stream programs on multicores with accelerators

Abhishek Udupa, R. Govindarajan, Matthew J. Thazhuthaveetil

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Tags: Computer science, CUDA, High-level Languages, nVidia, nVidia GeForce 8800 GTS, Package

November 23, 2010 by hgpu

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

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Tags: Biology, Computer science, CUDA, Error recovery, nVidia, Package

November 22, 2010 by hgpu

Parallel Position Weight Matrices Algorithms

Mathieu Giraud, Jean-Stephane Varre

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Tags: Biology, Computer science, CUDA, nVidia, nVidia GeForce 8800, nVidia GeForce GTX 280, Package

November 22, 2010 by hgpu

GPGPU computation and visualization of three-dimensional cellular automata

Stephane Gobron, Arzu Coltekin, Herve Bonafos and Daniel Thalmann

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Tags: Cellular automata, Computer science, Medicine, nVidia, nVidia GeForce 8800 GTX, OpenGL, Package, Visualization

November 20, 2010 by hgpu

Accelerating numerical solution of stochastic differential equations with CUDA

M. Januszewski, M. Kostur

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Tags: Computational Physics, CUDA, Diffusion equation, nVidia, Package, Physics, Tesla C1060

November 19, 2010 by hgpu

A GPGPU compiler for memory optimization and parallelism management

Yi Yang, Ping Xiang, Jingfei Kong, Huiyang Zhou

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Tags: Computer science, CUBLAS, CUDA, High-level Languages, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 280, Package

November 18, 2010 by hgpu

GPU-enabled FREALIGN: Accelerating single particle 3D reconstruction and refinement in Fourier space on graphic processors

Xueming Li, Nikolaus Grigorieff, Yifan Cheng

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Tags: Biology, CUDA, Electron microscopy, Image reconstruction, nVidia, Package

November 18, 2010 by hgpu

Fast free-form deformation using graphics processing units

Marc Modat, Gerard R. Ridgway, Zeike A. Taylor, Manja Lehmann, Josephine Barnes, David J. Hawkes, Nick C. Fox, Sebastien Ourselin

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Tags: Biology, CUDA, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTX, Package

November 17, 2010 by hgpu

permGPU: Using graphics processing units in RNA microarray association studies

Ivo Shterev, Sin H. Jung, Stephen George, Kouros Owzar

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Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 280, Package, RNA

November 17, 2010 by hgpu

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

Stanimire Tomov, Rajib Nath, Jack Dongarra

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Tags: BLAS, Computer science, CUBLAS, CUDA, Linear Algebra, nVidia, nVidia GeForce GTX 280, Package

November 17, 2010 by hgpu

Graphic processors to speed-up simulations for the design of high performance solar receptors

Sylvain Collange, Marc Daumas, David Defour

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Tags: ATI, ATI Radeon RX 1800 XL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Optics, Package, Physics

November 13, 2010 by hgpu

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Can Large Language Models Predict Parallel Code Performance?

PELSI: Power-Efficient Layer-Switched Inference

Efficient deep learning inference on end devices

Ouroboros: Virtualized Queues for dynamic memory management

Dynamic Memory Management on GPUs with SYCL

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high performance computing on graphics processing units: hgpu.org

Packages

Synergistic execution of stream programs on multicores with accelerators

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Parallel Position Weight Matrices Algorithms

GPGPU computation and visualization of three-dimensional cellular automata

Accelerating numerical solution of stochastic differential equations with CUDA

A GPGPU compiler for memory optimization and parallelism management

GPU-enabled FREALIGN: Accelerating single particle 3D reconstruction and refinement in Fourier space on graphic processors

Fast free-form deformation using graphics processing units

permGPU: Using graphics processing units in RNA microarray association studies

Accelerating the reduction to upper Hessenberg, tridiagonal, and bidiagonal forms through hybrid GPU-based computing

Graphic processors to speed-up simulations for the design of high performance solar receptors

Recent source codes

XaaS containers

microSYCL: SYCL micro-benchmarks repository

SYCL Container

CASS: Cuda-Amd aSSembly

Cluser of smartphones for edge computing application using TensorFlow

CFAL-bench

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Can Large Language Models Predict Parallel Code Performance?

PELSI: Power-Efficient Layer-Switched Inference

Ouroboros: Virtualized Queues for dynamic memory management

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