high performance computing on graphics processing units: hgpu.org

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Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support

Marius Erbert, Steffen Rechner, Matthias Muller-Hannemann

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, nVidia GeForce GTX 970, nVidia GeForce GTX Titan, Package

July 26, 2016 by hgpu

Lowering IrGL to CUDA

Sreepathi Pai, Keshav Pingali

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Tags: Compilers, Computer science, CUDA, nVidia, Programming Languages

July 20, 2016 by hgpu

THOR: A New and Flexible Global Circulation Model to Explore Planetary Atmospheres

Joao M. Mendonca, Simon L. Grimm, Luc Grosheintz, Kevin Heng

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Tags: Astrophysics, CUDA, Earth and Planetary Astrophysics, Earth and Space Sciences, nVidia, Tesla K20

July 20, 2016 by hgpu

Runtime Configurable Deep Neural Networks for Energy-Accuracy Trade-off

Hokchhay Tann, Soheil Hashemi, R. Iris Bahar, Sherief Reda

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Tags: Algorithms, ARM, ASIC, Computer science, CUDA, Deep learning, Neural networks, nVidia, nVidia Tegra TX1

July 20, 2016 by hgpu

Accelerating the Conjugate Gradient Algorithm with GPUs in CFD Simulations

Hartwig Anzt, Marc Baboulin, Jack Dongarra, Yvan Fournier, Frank Hulsemann, Amal Khabou, Yushan Wang

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Tags: cfd, Conjugate gradient solver, CUDA, Fluid dynamics, nVidia, OpenCL, Tesla K40

July 18, 2016 by hgpu

IODA: an Input/Output Deep Architecture for image labeling

J. Lerouge, R. Herault, Clement Chatelain, F. Jardin, R. Modzelewski

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Tags: Computer science, CUDA, Deep learning, Neural networks, nVidia, Package, Python, Tesla C1060, Theano

July 18, 2016 by hgpu

Stability and Performance of Various Singular Value QR Implementations on Multicore CPU with a GPU

Ichitaro Yamazaki, Stanimire Tomov, Jack Dongarra

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Tags: BLAS, Computer science, CUDA, Linear Algebra, Matrix decomposition, Mixed precision, Numerical Analysis, nVidia, Performance, Tesla K20

July 16, 2016 by hgpu

An investigation of GPU-based stiff chemical kinetics integration methods

Nicholas J. Curtis, Kyle E. Niemeyer, Chih-Jen Sung

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Tags: Algorithms, Chemistry, Computational Physics, CUDA, nVidia, Physics, Tesla C2075

July 16, 2016 by hgpu

GeauxDock: Accelerating Structure-Based Virtual Screening with Heterogeneous Computing

Ye Fang, Yun Ding, Wei P. Feinstein, David M. Koppelman, Juana Moreno, Mark Jarrell, J. Ramanujam, Michal Brylinski

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Tags: Algorithms, Chemistry, CUDA, Heterogeneous systems, Intel Xeon Phi, Medicine, Molecular dynamics, nVidia, nVidia GeForce GTX 980, OpenMP, Package

July 16, 2016 by hgpu

Accelerating Eulerian Fluid Simulation With Convolutional Networks

Jonathan Tompson, Kristofer Schlachter, Pablo Sprechmann, Ken Perlin

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Tags: 3D Graphics and Realism, CNN, Computational Complexity, CUDA, Deep learning, Fluid dynamics, Fluid simulation, Machine learning, nVidia, nVidia GeForce GTX Titan X

July 16, 2016 by hgpu

GPU Accelerated Discrete Element Method (DEM) Molecular Dynamics for Conservative, Faceted Particle Simulations

Matthew Spellings, Ryan L. Marson, Joshua A. Anderson, Sharon C. Glotzer

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, nVidia Quadro M 6000, Package, Particle simulation, Physics

July 13, 2016 by hgpu

OpenFace: A general-purpose face recognition library with mobile applications

Brandon Amos, Bartosz Ludwiczuk, Mahadev Satyanarayanan

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Tags: Computer science, Computer vision, CUDA, Deep learning, Lua, Neural networks, nVidia, Package, Python, Tesla K40

July 13, 2016 by hgpu

MSCCL++: A GPU-driven communication stack for scalable AI applications

MSCCL++: Rethinking GPU Communication Abstractions for Cutting-edge AI Applications

Benchmark compute shader of Unity against InteropUnityCUDA

InteropUnityCUDA: A Tool for Interoperability Between Unity and CUDA

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

DeepCompile: A Compiler-Driven Approach to Optimizing Distributed Deep Learning Training

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

GigaAPI for GPU Parallelization

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

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high performance computing on graphics processing units: hgpu.org

Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support

Lowering IrGL to CUDA

THOR: A New and Flexible Global Circulation Model to Explore Planetary Atmospheres

Runtime Configurable Deep Neural Networks for Energy-Accuracy Trade-off

Accelerating the Conjugate Gradient Algorithm with GPUs in CFD Simulations

IODA: an Input/Output Deep Architecture for image labeling

Stability and Performance of Various Singular Value QR Implementations on Multicore CPU with a GPU

An investigation of GPU-based stiff chemical kinetics integration methods

GeauxDock: Accelerating Structure-Based Virtual Screening with Heterogeneous Computing

Accelerating Eulerian Fluid Simulation With Convolutional Networks

GPU Accelerated Discrete Element Method (DEM) Molecular Dynamics for Conservative, Faceted Particle Simulations

OpenFace: A general-purpose face recognition library with mobile applications

Recent source codes

MSCCL++: A GPU-driven communication stack for scalable AI applications

Benchmark compute shader of Unity against InteropUnityCUDA

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

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