high performance computing on graphics processing units: hgpu.org

Kenji Ogawa, Tatsumi Aoyama, Hiroaki Ikeda, Etsuko Itou, Masafumi Kurachi, C.-J. David Lin, Hideo Matsufuru, Hiroshi Ohki, Tetsuya Onogi, Eigo Shintani, Takeshi Yamazaki

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Tags: CUDA, GPU cluster, High Energy Physics - Lattice, nVidia, Physics, QCD, Tesla C1060

November 8, 2011 by hgpu

Improving CUDASW++, a Parallelization of Smith-Waterman for CUDA Enabled Devices

Doug Hains, Zach Cashero, Mark Ottenberg, Wim Bohm, Sanjay Rajopadhye

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, Sequence alignment, Smith-Waterman algorithm, Tesla C1060, Tesla C2050

November 5, 2011 by hgpu

Performance Portability of a GPU Enabled Factorization with the DAGuE Framework

George Bosilca, Aurelien Bouteiller, Thomas Herault, Pierre Lemarinier, Narapat Ohm Saengpatsa, Stanimire Tomov, Jack J. Dongarra

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Tags: Computer science, Factorization, GPU cluster, Heterogeneous systems, Linear Algebra, nVidia, Performance, Tesla C1060, Tesla C2050, Tesla S1070

November 3, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Natural HPC substrate: Exploitation of mixed multicore CPU and GPUs

Seismic Wave Propagation Simulation Using Accelerated Support Operator Rupture Dynamics on Multi-GPU

A fast and robust seed flooding algorithm on GPU for Voronoi diagram generation

B-CALM: An open-source GPU-based 3D-FDTD with multi-pole dispersion for plasmonics

rCUDA: Reducing the number of GPU-based accelerators in high performance clusters

GPU-based Signal Processing Scheme for Bioinspired Optical Flow

Acceleration of Hessenberg Reduction for Nonsymmetric Eigenvalue Problems in a Hybrid CPU-GPU Computing Environment

Performance analysis of a hybrid MPI/CUDA implementation of the NASLU benchmark

High performance massively parallel direct N-body simulations on large GPU clusters

The Infrared behavior of SU(3) Nf=12 gauge theory -about the existence of conformal fixed point-

Improving CUDASW++, a Parallelization of Smith-Waterman for CUDA Enabled Devices

Performance Portability of a GPU Enabled Factorization with the DAGuE Framework

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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