high performance computing on graphics processing units: hgpu.org

hgpu.org » Medicine

Real-time volumetric image reconstruction and 3D tumor localization based on a single x-ray projection image for lung cancer radiotherapy

Ruijiang Li, Xun Jia, John H. Lewis, Xuejun Gu, Michael Folkerts, Chunhua Men, Steve B. Jiang

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Tags: CUDA, Image reconstruction, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 12, 2010 by hgpu

Ultra-fast treatment plan optimization for volumetric modulated arc therapy (VMAT)

Chunhua Men, H. Edwin Romeijn, Xun Jia, Steve B. Jiang

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Tags: CUDA, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 11, 2010 by hgpu

A GPU implementation of a track-repeating algorithm for proton radiotherapy dose calculations

Pablo P Yepes, Dragan Mirkovic, Phillip J Taddei

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Tags: CUDA, Medical Physics, Medicine, Monte Carlo simulation, Nuclear Experiment, nVidia, nVidia GeForce GTX 295, Physics, Proton radiotherapy

November 10, 2010 by hgpu

GPU-based Iterative Cone Beam CT Reconstruction Using Tight Frame Regularization

Xun Jia, Bin Dong, Yifei Lou, Steve B. Jiang

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Tags: Computed tomography, CUDA, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 10, 2010 by hgpu

GPU-based Low-dose 4DCT Reconstruction via Temporal Non-local Means

Zhen Tian, Xun Jia, Steve B. Jiang

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Tags: Computed tomography, CUDA, Image reconstruction, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 10, 2010 by hgpu

GPU-based Low Dose CT Reconstruction via Edge-preserving Total Variation Regularization

Zhen Tian, Xun Jia, Kehong Yuan, Tinsu Pan, Steve B. Jiang

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Tags: Computed tomography, CT, CUBLAS, CUDA, Image reconstruction, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 9, 2010 by hgpu

Monte Carlo randomization tests for large-scale abundance datasets on the GPU

John L. Van Hemert, Julie A. Dickerson

Tags: Bioinformatics, Biology, CUDA, Medicine, Metabolomics, Monte Carlo simulation, Next-Generation sequencing, nVidia

November 8, 2010 by hgpu

Parallel medical image reconstruction: from graphics processing units (GPU) to Grids

Maraike Schellmann, Sergei Gorlatch, Dominik Meilander, Thomas Kosters, Klaus Schafers, Frank Wubbeling, Martin Burger

Tags: Cell processor, CUDA, Image processing, Image reconstruction, Medicine, nVidia, PET, Tomography

November 8, 2010 by hgpu

GPU-based Real-Time Soft Tissue Deformation with Cutting and Haptic Feedback

Hadrien Courtecuisse, Hoeryong Jung, Jeremie Allard, Christian Duriez, Doo Y. Lee, Stephane Cotin

Tags: Biology, Biomechanics, Finite element method, Medicine, Surgical simulation

November 8, 2010 by hgpu

The CUBLAS and CULA based GPU acceleration of adaptive finite element framework for bioluminescence tomography

Bo Zhang, Xiang Yang, Fei Yang, Xin Yang, Chenghu Qin, Dong Han, Xibo Ma, Kai Liu, Jie Tian

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Tags: CUBLAS, CUDA, CULA, Image processing, Image reconstruction, Medicine, nVidia GeForce GT 240

November 8, 2010 by hgpu

Parallelized computation for computer simulation of electrocardiograms using personal computers with multi-core CPU and general-purpose GPU

Wenfeng Shen, Daming Wei, Weimin Xu, Xin Zhu, Shizhong Yuan

Tags: CUDA, Electrocardiograms simulation, Medicine, nVidia, nVidia GeForce 8800 GT, OpenMP, Optimization

November 8, 2010 by hgpu

GPU-based physical cut in interactive haptic simulations

Davide Zerbato, Daniele Baschirotto, Davide Baschirotto, Debora Botturi, Paolo Fiorini

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Tags: GLSL, Medicine, nVidia, nVidia GeForce 8800 GTX, Surgical simulation

November 7, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Real-time volumetric image reconstruction and 3D tumor localization based on a single x-ray projection image for lung cancer radiotherapy

Ultra-fast treatment plan optimization for volumetric modulated arc therapy (VMAT)

A GPU implementation of a track-repeating algorithm for proton radiotherapy dose calculations

GPU-based Iterative Cone Beam CT Reconstruction Using Tight Frame Regularization

GPU-based Low-dose 4DCT Reconstruction via Temporal Non-local Means

GPU-based Low Dose CT Reconstruction via Edge-preserving Total Variation Regularization

Monte Carlo randomization tests for large-scale abundance datasets on the GPU

Parallel medical image reconstruction: from graphics processing units (GPU) to Grids

GPU-based Real-Time Soft Tissue Deformation with Cutting and Haptic Feedback

The CUBLAS and CULA based GPU acceleration of adaptive finite element framework for bioluminescence tomography

Parallelized computation for computer simulation of electrocardiograms using personal computers with multi-core CPU and general-purpose GPU

GPU-based physical cut in interactive haptic simulations

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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