high performance computing on graphics processing units: hgpu.org

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Accelerating Smith-Waterman on Heterogeneous CPU-GPU Systems

Jaideep Singh, Ipseeta Aruni

Tags: Bioinformatics, Biology, CUDA, Heterogeneous systems, nVidia, Smith-Waterman algorithm

June 24, 2011 by hgpu

Implementation of a Soft Morphological Filter Based on GPU Framework

Lipeng Wang, Hanbin Wang

Tags: Computer science, CUDA, Filtering, nVidia

June 24, 2011 by hgpu

An algorithm for efficient computation of spatial impulse response on the GPU with application in ultrasound simulation

Ramtin Shams, Florian Luna, Richard I. Hartley

Tags: Algorithms, CUDA, Medicine, nVidia, Ultrasound

June 24, 2011 by hgpu

GPU-Based Parallel Signature Scanning and Hash Generation

Bernhard Fechner

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce GTX 260, Pattern Search, Security, Sequence matching

June 24, 2011 by hgpu

Fast implementation of fully iterative scatter corrected OSEM for HRRT using GPU

Kyung Sang Kim, Jong Chul Ye

Tags: CUDA, Image reconstruction, Medicine, nVidia, PET, Tesla C1060

June 23, 2011 by hgpu

GCS: High-Performance Gate-Level Simulation with GP-GPUs

Debapriya Chatterjee, Andrew DeOrio, Valeria Bertacco

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Tags: CAD, Computer science, CUDA, Electronic design automation, nVidia, nVidia GeForce 8800 GT

June 23, 2011 by hgpu

GPU Implementation of the LFT Shape Matching Algorithm

Adrie Kooijman, Joris Vergeest

Tags: CAD, Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 260

June 23, 2011 by hgpu

Cloth Simulation Using AABB Hierarchies and GPU Parallelism

Frizzi Alejandra San Roman Salazar, Bruno Brandoli Machado, Alexander Victor Ocsa Mamani, Maria Cristina Ferreira de Oliveira

Tags: 3D Graphics and Realism, Algorithms, Computer science, CUDA, nVidia, Physics-based simulation, Rendering

June 22, 2011 by hgpu

Practical parallel imaging compressed sensing MRI: Summary of two years of experience in accelerating body MRI of pediatric patients

S.S. Vasanawala, M.J. Murphy, M.T. Alley, P. Lai, K. Keutzer, J.M. Pauly, M. Lustig

Source codes

Tags: CUDA, Image reconstruction, Medicine, MRI, nVidia, Package

June 21, 2011 by hgpu

GPU-based acceleration of MPIE/MoM matrix calculation for the analysis of microstrip circuits

Danilo De Donno, Alessandra Esposito, Giuseppina Monti, Luciano Tarricone

Tags: Algorithms, CUDA, Electrodynamics, nVidia

June 21, 2011 by hgpu

Improved Programming of GPU Architectures through Automated Data Allocation and Loop Restructuring

Andrea Di Biagio, Giovanni Agosta

Tags: Computer science, CUDA, nVidia, OpenMP, Programming techniques

June 21, 2011 by hgpu

GPU accelerated rotation-based emission tomography reconstruction

S. Pedemonte, A. Bousse, K. Erlandsson, M. Modat, S. Arridge, B. F. Hutton, S. Ourselin

Source codes

Tags: CUDA, Image reconstruction, Medicine, nVidia, Package, Tomography

June 21, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Accelerating Smith-Waterman on Heterogeneous CPU-GPU Systems

Implementation of a Soft Morphological Filter Based on GPU Framework

An algorithm for efficient computation of spatial impulse response on the GPU with application in ultrasound simulation

GPU-Based Parallel Signature Scanning and Hash Generation

Fast implementation of fully iterative scatter corrected OSEM for HRRT using GPU

GCS: High-Performance Gate-Level Simulation with GP-GPUs

GPU Implementation of the LFT Shape Matching Algorithm

Cloth Simulation Using AABB Hierarchies and GPU Parallelism

Practical parallel imaging compressed sensing MRI: Summary of two years of experience in accelerating body MRI of pediatric patients

GPU-based acceleration of MPIE/MoM matrix calculation for the analysis of microstrip circuits

Improved Programming of GPU Architectures through Automated Data Allocation and Loop Restructuring

GPU accelerated rotation-based emission tomography reconstruction

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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