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Mashing load balancing algorithm to boost hybrid kernels in molecular dynamics simulations

Raúl Nozal, Jose Luis Bosque

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Tags: AMD Radeon RX 5700 XT, ATI, Computer science, Heterogeneous systems, HPC, Molecular dynamics, OpenCL, OpenMP, Package, performance portability

August 28, 2023 by hgpu

Novel insights on atomic synchronization for sort-based group-by on GPUs

Bala Gurumurthy, David Broneske, Martin Schäler, Thilo Pionteck

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Tags: Computer science, Databases, Hashing, Heterogeneous systems, nVidia, nVidia A100, nVidia GeForce GTX 1050 Ti, nVidia GeForce RTX 2080 Ti, nVidia V100, OpenCL, Package, Sorting

August 28, 2023 by hgpu

Porting Batched Iterative Solvers onto Intel GPUs with SYCL

Phuong Nguyen, Pratik Nayak, Hartwig Anzt

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Tags: Computer science, CUDA, Intel, Intel Data Center GPU Max 1550, nVidia, nVidia A100, nVidia H100, Package, performance portability, Physics, SYCL

August 20, 2023 by hgpu

APACE: AlphaFold2 and advanced computing as a service for accelerated discovery in biophysics

Hyun Park, Parth Patel, Roland Haas, E. A. Huerta

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Tags: AI, Algorithms, Biology, Biomolecules, Biophysics, nVidia, nVidia A100, nVidia A40, Package

August 20, 2023 by hgpu

Quantifying OpenMP: Statistical Insights into Usage and Adoption

Tal Kadosh, Niranjan Hasabnis, Timothy Mattson, Yuval Pinter, Gal Oren

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Tags: Computer science, CUDA, Databases, Fortran, HPC, MPI, nVidia, OpenACC, OpenCL, OpenMP, Package, SYCL

August 20, 2023 by hgpu

Isolated Scheduling for Distributed Training Tasks in GPU Clusters

Xinchi Han, Weihao Jiang, Peirui Cao, Qinwei Yang, Yunzhuo Liu, Shuyao Qi, Shengkai Lin, Shizhen Zhao

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Tags: Computer science, GPU cluster, Machine learning, Neural networks, nVidia, nVidia V100, Package

August 13, 2023 by hgpu

Monadic Deep Learning

Bo Yang, Zhihao Zhang Kirisame Marisa, Kai Shi

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Tags: Computer science, CUDA, Deep learning, Java, Neural networks, OpenCL, Package, Scala

July 30, 2023 by hgpu

Bandicoot: C++ Library for GPU Linear Algebra and Scientific Computing

Ryan R. Curtin, Marcus Edel, Conrad Sanderson

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Tags: Computer science, CUDA, Linear Algebra, nVidia, nVidia GeForce RTX 2080 Ti, OpenCL, Package, Programming techniques

July 30, 2023 by hgpu

A portable C++ library for memory and compute abstraction on multi-core CPUs and GPUs

Pietro Incardona, Aryaman Gupta, Serhii Yaskovets, Ivo F. Sbalzarini

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Tags: AMD RX Vega 64, ATI, Computer science, CUDA, nVidia, nVidia A100, nVidia GeForce RTX 3090, OpenACC, OpenCL, OpenMP, Package, Performance, performance portability, SYCL

July 30, 2023 by hgpu

Creating a Dataset Supporting Translation Between OpenMP Fortran and C++ Code

Bin Lei, Caiwen Ding, Le Chen, Pei-Hung Lin, Chunhua Liao

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Tags: Computer science, CUDA, Fortran, Machine learning, nVidia, nVidia RTX 6000 Ada, OpenMP, Package

July 24, 2023 by hgpu

qecGPT: decoding Quantum Error-correcting Codes with Generative Pre-trained Transformers

Hanyan Cao, Feng Pan, Yijia Wang, Pan Zhang

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Tags: Artificial intelligence, Computer science, Neural networks, nVidia, nVidia A100, Package

July 24, 2023 by hgpu

Mystique: Enabling Accurate and Scalable Generation of Production AI Benchmarks

Mingyu Liang, Wenyin Fu, Louis Feng, Zhongyi Lin, Pavani Panakanti, Shengbao Zheng, Srinivas Sridharan, Christina Delimitrou

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Tags: AI, Benchmarking, Code generation, Computer science, CUDA, nVidia, Package, Performance, PyTorch, Tesla A100, Tesla V100

July 16, 2023 by hgpu

Efficient GPU Implementation of Multi-Precision Integer Division

ParEval: A Parallel Code Evaluation Benchmark

ParEval-Repo: A Benchmark Suite for Evaluating LLMs with Repository-level HPC Translation Tasks

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

Libra: Synergizing CUDA and Tensor Cores for High-Performance Sparse Matrix Multiplication

exa-AMD: Exascale Accelerated Materials Discovery

Accelerated discovery and design of Fe-Co-Zr magnets with tunable magnetic anisotropy through machine learning and parallel computing

WiLLM: An Open Wireless LLM Communication System

Vcc: the Vulkan Clang Compiler

No More Shading Languages: Compiling C++ to Vulkan Shaders

hpcbench: A set of benchmarking utilities for biomolecular simulation tools

Engineering Supercomputing Platforms for Biomolecular Applications

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

chemtrain: Training Molecular Dynamics Potentials in JAX

chemtrain-deploy: A parallel and scalable framework for machine learning potentials in million-atom MD simulations

microSYCL: SYCL micro-benchmarks repository

Exploring SYCL as a Portability Layer for High-Performance Computing on CPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Mashing load balancing algorithm to boost hybrid kernels in molecular dynamics simulations

Novel insights on atomic synchronization for sort-based group-by on GPUs

Porting Batched Iterative Solvers onto Intel GPUs with SYCL

APACE: AlphaFold2 and advanced computing as a service for accelerated discovery in biophysics

Quantifying OpenMP: Statistical Insights into Usage and Adoption

Isolated Scheduling for Distributed Training Tasks in GPU Clusters

Monadic Deep Learning

Bandicoot: C++ Library for GPU Linear Algebra and Scientific Computing

A portable C++ library for memory and compute abstraction on multi-core CPUs and GPUs

Creating a Dataset Supporting Translation Between OpenMP Fortran and C++ Code

qecGPT: decoding Quantum Error-correcting Codes with Generative Pre-trained Transformers

Mystique: Enabling Accurate and Scalable Generation of Production AI Benchmarks

Recent source codes

Efficient GPU Implementation of Multi-Precision Integer Division

ParEval: A Parallel Code Evaluation Benchmark

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

exa-AMD: Exascale Accelerated Materials Discovery

WiLLM: An Open Wireless LLM Communication System

Vcc: the Vulkan Clang Compiler

hpcbench: A set of benchmarking utilities for biomolecular simulation tools

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

chemtrain: Training Molecular Dynamics Potentials in JAX

microSYCL: SYCL micro-benchmarks repository

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