high performance computing on graphics processing units: hgpu.org

Trevor Bekolay, James Bergstra, Eric Hunsberger, Travis DeWolf, Terrence C. Stewart, Daniel Rasmussen, Xuan Choo, Aaron Russell Voelker, Chris Eliasmith

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Tags: ATI, ATI Radeon HD 7970, Biology, Neuroscience, nVidia, nVidia GeForce GTX 280, OpenCL, Package, PyOpenCL, Python

January 9, 2014 by hgpu

pharos: performance monitoring instrumentation for multi-FPGA systems

Performance Monitoring of Multi-FPGA Systems

Efficient Video Compression via Content-Adaptive Super-Resolution

CUDA Modular Polynomial (CUMODP) Library

Parallel Arbitrary-precision Integer Arithmetic

Energy-aware Task Scheduling with Deadline Constraint in DVFS-enabled Heterogeneous Clusters

CUDA Tutorial - Cryptanalysis of Classical Ciphers Using Modern GPUs and CUDA

CUDA Tutorial – Cryptanalysis of Classical Ciphers Using Modern GPUs and CUDA

Ginkgo: a high-performance linear algebra library for manycore systems, with a focus on sparse solution of linear systems

Porting a sparse linear algebra math library to Intel GPUs

Exa.TrkX: Machine Learning for Particle Track Reconstruction

Physics and Computing Performance of the Exa.TrkX TrackML Pipeline

A Compiler Infrastructure for Accelerator Generators

LIKWID: A Lightweight Performance-Oriented Tool Suite

ECM modeling and performance tuning of SpMV and Lattice QCD on A64FX

hls4ml: A package for machine learning inference in FPGAs

hls4ml: An Open-Source Codesign Workflow to Empower Scientific Low-Power Machine Learning Devices

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2021

April

27-29

Munich, Germany

9th International Workshop on OpenCL and SYCL, 2021

2020

December

10-14

Virtually in Barcelona, Spain

The 18th International Conference on High Performance Computing & Simulation (HPCS), 2020

2020

November

24-27

Naha, Okinawa, Japan

The Fifth International Workshop on GPU Computing and AI (GCA), 2020

2021

January

13-15

Shenzhen, China

2nd International Conference on Frontiers of Intelligent Manufacturing and Automation (CFIMA’21), 2021

2020

December

14-16

Bangkok, Thailand

International Conference on Cyber Physical Systems and IoT (CPSIOT’20), 2020

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high performance computing on graphics processing units: hgpu.org

Applications

MaxSSmap: A GPU program for short read mapping with the maximum scoring subsequence

Parallelization of DNA alignment algorithms using GPUs

Hybrid Framework for pairwise DNA Sequence Alignment Using the CUDA compatible GPU

QuickProbs – A Fast Multiple Sequence Alignment Algorithm Designed for Graphics Processors

A Multi GPU Read Alignment Algorithm with Model-based Performance Optimization

MICA: A fast short-read aligner that takes full advantage of Intel Many Integrated Core Architecture (MIC)

Parallel implementation of 3D protein structure similarity searches using a GPU and the CUDA

GPU-Accelerated BWT Construction for Large Collection of Short Reads

Accelerating a Bayesian Phylogenetic Inference Application with OpenACC

Optimal Alignment of Three Sequences On A GPU

A tool for mapping Single Nucleotide Polymorphisms using Graphics Processing Units

Nengo: a Python tool for building large-scale functional brain models

Recent source codes

pharos: performance monitoring instrumentation for multi-FPGA systems

Efficient Video Compression via Content-Adaptive Super-Resolution

CUDA Modular Polynomial (CUMODP) Library

Energy-aware Task Scheduling with Deadline Constraint in DVFS-enabled Heterogeneous Clusters

CUDA Tutorial - Cryptanalysis of Classical Ciphers Using Modern GPUs and CUDA

Ginkgo: a high-performance linear algebra library for manycore systems, with a focus on sparse solution of linear systems

Exa.TrkX: Machine Learning for Particle Track Reconstruction

A Compiler Infrastructure for Accelerator Generators

LIKWID: A Lightweight Performance-Oriented Tool Suite

hls4ml: A package for machine learning inference in FPGAs

Most viewed papers (last 30 days)

Featured events

9th International Workshop on OpenCL and SYCL, 2021

The 18th International Conference on High Performance Computing & Simulation (HPCS), 2020

The Fifth International Workshop on GPU Computing and AI (GCA), 2020

2nd International Conference on Frontiers of Intelligent Manufacturing and Automation (CFIMA’21), 2021

International Conference on Cyber Physical Systems and IoT (CPSIOT’20), 2020