high performance computing on graphics processing units: hgpu.org

Ruibang Luo, Thomas Wong, Jianqiao Zhu, Chi-Man Liu, Edward Wu, Lap-Kei Lee, Haoxiang Lin, Wenjuan Zhu, David W. Cheung, Hing-Fung Ting, Siu-Ming Yiu, Chang Yu, Yingrui Li, Ruiqiang Li, Tak-Wah Lam

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Tags: Algorithms, Bioinformatics, Biology, CUDA, Next-Generation sequencing, nVidia, Package, Tesla C2070, Tesla M2050

February 25, 2013 by hgpu

True 4-Bit Quantized CNN Training on CPU

True 4-Bit Quantized Convolutional Neural Network Training on CPU: Achieving Full-Precision Parity

cuFuzz: A GPU-oriented coverage-guided fuzzer for userland CUDA application

Hunting CUDA Bugs at Scale with cuFuzz

KernelSkill: A Multi-Agent Framework for GPU Kernel Optimization

MSKernelBench & CUDAMaster

Making LLMs Optimize Multi-Scenario CUDA Kernels Like Experts

EvoScientist: Harness Vibe Research with Self-evolving AI Scientists

EvoScientist: Towards Multi-Agent Evolving AI Scientists for End-to-End Scientific Discovery

RepoLaunch: Automating Build and Test Pipeline of Code Repositories on ANY Language and ANY Platform

RepoLaunch: Automating Build & Test Pipeline of Code Repositories on ANY Language and ANY Platform

RepoLaunch: Automating Build and Test Pipeline of Code Repositories on ANY Language and ANY Platform

RepoLaunch: Automating Build & Test Pipeline of Code Repositories on ANY Language and ANY Platform

CONCUR: a benchmark designed to evaluate multithreaded Java code generated by LLMs

CONCUR: Benchmarking LLMs for Concurrent Code Generation

HIPRT: Ray Tracing using HIP

Ray Tracing using HIP

MXFP4 Training Support Codebase

Practical FP4 Training for Large-Scale MoE Models on Hopper GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

The GPU-based High-performance Pattern-matching Algorithm for Intrusion Detection

Simulation of Biological Tissue using Mass-Spring-Damper Models

GPU-based Steady-State Solution of the Chemical Master Equation

SW# – GPU enabled exact alignments on genome scale

GPU-SD and DPD Parallelization for Gromacs tools for molecular dynamics simulations

CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

Parallel Implementation of Dynamic Programming Algorithm Using Graphics Processing Unit

CMCpy: Genetic Code-Message Coevolution Models in Python

GPU based Eulerian Assembly of Genomes

On continuous maximum flow image segmentation algorithm

SOAP3-dp: Fast, Accurate and Sensitive GPU-based Short Read Aligner

Recent source codes

True 4-Bit Quantized CNN Training on CPU

cuFuzz: A GPU-oriented coverage-guided fuzzer for userland CUDA application

KernelSkill: A Multi-Agent Framework for GPU Kernel Optimization

MSKernelBench & CUDAMaster

EvoScientist: Harness Vibe Research with Self-evolving AI Scientists

RepoLaunch: Automating Build and Test Pipeline of Code Repositories on ANY Language and ANY Platform

RepoLaunch: Automating Build and Test Pipeline of Code Repositories on ANY Language and ANY Platform

CONCUR: a benchmark designed to evaluate multithreaded Java code generated by LLMs

HIPRT: Ray Tracing using HIP

MXFP4 Training Support Codebase

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