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Improving CUDASW++, a Parallelization of Smith-Waterman for CUDA Enabled Devices

Doug Hains, Zach Cashero, Mark Ottenberg, Wim Bohm, Sanjay Rajopadhye

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, Sequence alignment, Smith-Waterman algorithm, Tesla C1060, Tesla C2050

November 5, 2011 by hgpu

Power Flow Analysis on CUDA-based GPU

Yizheng Liao

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Tags: Algorithms, CUDA, nVidia, nVidia GeForce GTS 250, Power Systems Simulation, Thesis

November 5, 2011 by hgpu

Real-time Flame Rendering with GPU and CUDA

Wei Wei,Yanqiong Huang

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Tags: 3D Graphics and Realism, Computer science, CUDA, Fluid dynamics, nVidia, nVidia GeForce 7600 GS, OpenGL, Particle simulation, Rendering

November 5, 2011 by hgpu

Accelerating a TV based JPEG decompression algorithm with Cuda

Martin Holler

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Tags: Algorithms, Compression, CUDA, Image processing, nVidia, nVidia GeForce GTX 280

November 4, 2011 by hgpu

A CUDA Implementation of Independent Component Analysis in the Time-Frequency Domain

Radoslaw Mazur, Alfred Mertins

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Tags: Algorithms, CUDA, nVidia, nVidia GeForce 8800 GTS, Package, Signal processing

November 4, 2011 by hgpu

Parallelization of maximum likelihood fits with OpenMP and CUDA

Sverre Jarp, Alfio Lazzaro, Julien Leduc, Andrzej Nowak, Felice Pantaleo

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Tags: Algorithms, Benchmarking, CUDA, Numerical Analysis, nVidia, nVidia GeForce GTX 470, OpenMP, Physics

November 4, 2011 by hgpu

Combined acoustic and optical trapping

G. Thalhammer, R. Steiger, M. Meinschad, M. Hill, S. Bernet, M. Ritsch-Marte

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Tags: ATI, ATI Radeon HD 5850, Mesoscale and Nanoscale Physics, Optical trapping, Physics

November 4, 2011 by hgpu

PEPSC: A Power-Efficient Processor for Scientific Computing

Ganesh Dasika, Ankit Sethia, Trevor Mudge, Scott Mahlke

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Tags: Computer science, Energy-efficient computing, Hardware Architecture, nVidia, nVidia GeForce GTX 285, Prefetch

November 4, 2011 by hgpu

Gyrofluid Modeling of Turbulent, Kinetic Physics

Kate Marie Despain

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Tags: CUDA, Fortran, MPI, nVidia, nVidia GeForce 9800 GTX, Package, Physics, Plasma physics

November 4, 2011 by hgpu

Semi-Global Matching-Motivation, Developments and Applications

Heiko Hirschmuller

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Tags: Computer science, Computer vision, FPGA, nVidia, nVidia GeForce GTX 275, OpenCL, OpenGL, Sensing

November 4, 2011 by hgpu

Inter-cluster communication on clustered SIMD architectures

Kris Hoogendoorn

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Tags: Computer science, Hardware Architecture, nVidia, nVidia GeForce GTX 580

November 4, 2011 by hgpu

VASP on a GPU: application to exact-exchange calculations of the stability of elemental boron

Maxwell Hutchinson, Michael Widom

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Tags: Computational chemistry, Computational Physics, Condensed matter, CUDA, nVidia, Physics, Tesla C2050, Tesla C2075

November 4, 2011 by hgpu

CL4SE: A Context Learning Benchmark For Software Engineering Tasks

CodeScaler: Scaling Code LLM Training and Test-Time Inference via Execution-Free Reward Models

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Dr. Kernel: Reinforcement Learning Done Right for Triton Kernel Generations

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

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high performance computing on graphics processing units: hgpu.org

Applications

Improving CUDASW++, a Parallelization of Smith-Waterman for CUDA Enabled Devices

Power Flow Analysis on CUDA-based GPU

Real-time Flame Rendering with GPU and CUDA

Accelerating a TV based JPEG decompression algorithm with Cuda

A CUDA Implementation of Independent Component Analysis in the Time-Frequency Domain

Parallelization of maximum likelihood fits with OpenMP and CUDA

Combined acoustic and optical trapping

PEPSC: A Power-Efficient Processor for Scientific Computing

Gyrofluid Modeling of Turbulent, Kinetic Physics

Semi-Global Matching-Motivation, Developments and Applications

Inter-cluster communication on clustered SIMD architectures

VASP on a GPU: application to exact-exchange calculations of the stability of elemental boron

Recent source codes

CL4SE: A Context Learning Benchmark For Software Engineering Tasks

CodeScaler: Scaling Code LLM Training and Test-Time Inference via Execution-Free Reward Models

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Vortex-Optimized Light-weight Toolchain (VOLT)

SciDef: Automated Definition Extraction from Scientific Literature

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

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