high performance computing on graphics processing units: hgpu.org

Programming

Accelerated Sparse Matrix Operations in Nonlinear Least Squares Solvers

Lukas Polok

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Tags: Algorithms, Computer science, Differential equations, Factorization, FEM, Finite element method, Linear Algebra, nVidia, nVidia GeForce GTX 680, OpenCL, Partial differential equations, PDEs, Sparse matrix, Tesla K40, Thesis

December 19, 2017 by hgpu

Investigating Half Precision Arithmetic to Accelerate Dense Linear System Solvers

Azzam Haidar, Panruo Wu, Stanimire Tomov, Jack Dongarra

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Tags: Algorithms, Artificial intelligence, BLAS, Computer science, Linar Algebra, Mixed precision, Neural networks, nVidia, Tesla P100

December 10, 2017 by hgpu

HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

Nilay Khare, Alind Khare and Farhan Khan

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Tags: Algorithms, Bioinformatics, Biology, BLAST, CUDA, Hadoop, nVidia, nVidia Quadro 2000, nVidia Quadro 600, Tesla C2075

December 3, 2017 by hgpu

A Hybrid-parallel Architecture for Applications in Bioinformatics

Jan Christian Kassens

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Tags: Algorithms, Bioinformatics, Biology, Computer science, CUDA, FPGA, nVidia, nVidia GeForce GTX 780 Ti, Thesis

December 3, 2017 by hgpu

2D Image Convolution using Three Parallel Programming Models on the Xeon Phi

Ashkan Tousimojarad, Wim Vanderbauwhede, W Paul Cockshott

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Tags: Algorithms, Computer science, Intel Xeon Phi, OpenCL, OpenMP, Programming Languages

November 30, 2017 by hgpu

Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

Shaohuai Shi, Xiaowen Chu

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Tags: Algorithms, Benchmarking, Caffe, Computer science, CUDA, Deep learning, MPI, Neural networks, nVidia, Package, Performance, TensorFlow, Tesla P40, Torch

November 26, 2017 by hgpu

High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL

Ernst Joachim Houtgast, Vlad-Mihai Sima, Zaid Al-Ars

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Tags: Algorithms, Bioinformatics, Biology, FPGA, OpenCL, Smith-Waterman algorithm

November 26, 2017 by hgpu

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

Edans F. O. Sandes, George Teodoro, Alba C. M. A. Melo

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Tags: Algorithms, Computer science, CUDA, Databases, Filtering, nVidia, nVidia GeForce GTX 980 Ti

November 21, 2017 by hgpu

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Stefan Rosenberger, Gundolf Haase

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 1060, OpenACC, OpenMP, Sparse matrix

November 21, 2017 by hgpu

Vectorized algorithm for multidimensional Monte Carlo integration on modern GPU, CPU and MIC architectures

Przemyslaw Stpiczynski

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Tags: Algorithms, Computer science, Intel Xeon Phi, Monte Carlo integration, nVidia, OpenACC, OpenMP, Pseudo-random number generators, Tesla K40

November 12, 2017 by hgpu

Scalable and massively parallel Monte Carlo photon transport simulations for heterogeneous computing platforms

Leiming Yu, Fanny Nina-Paravecino, David Kaeli, Qianqian Fang

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Tags: Algorithms, AMD R9 Nano, AMD Radeon RX 480, ATI, Computational Physics, Heterogeneous systems, nVidia, nVidia GeForce GTX 1050 Ti, nVidia GeForce GTX 1080 Ti, nVidia GeForce GTX 590, nVidia GeForce GTX 980 Ti, nVidia GeForce GTX Titan X, OpenCL, Package, Physics

November 12, 2017 by hgpu

Scalable Streaming Tools for Analyzing N-body Simulations: Finding Halos and Investigating Excursion Sets in One Pass

Nikita Ivkin, Zaoxing Liu, Lin F. Yang, Srinivas Suresh Kumar, Gerard Lemson, Mark Neyrinck, Alexander S. Szalay, Vladimir Braverman, Tamas Budavari

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Tags: Algorithms, Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, nVidia GeForce GTX 1080, Tesla C2050, Tesla C2070

November 7, 2017 by hgpu

Kernel Library for LLM Serving

Compiler and Runtime Systems for Generative AI Models

Adaptivity in AdaptiveCpp: Optimizing Performance by Leveraging Runtime Information During JIT-Compilation

Neptune: Advanced ML Operator Fusion for Locality and Parallelism on GPUs

Genten: Software for Generalized Tensor Decompositions by Sandia National Laboratories

A Performance Portable Matrix Free Dense MTTKRP in GenTen

Interleaved Learning and Exploration: A Self-Adaptive Fuzz Testing Framework for MLIR

Pinocchio: PINpointing Orbit Crossing Collapsed Hierarchical Objects

Accelerating cosmological simulations on GPUs: a portable approach using OpenMP

KernelCoder: trained on a curated dataset of reasoning traces and CUDA kernel pairs

ConCuR: Conciseness Makes State-of-the-Art Kernel Generation

VibeCodeHPC - Multi Agentic Vibe Coding for HPC

VibeCodeHPC: An Agent-Based Iterative Prompting Auto-Tuner for HPC Code Generation Using LLMs

Compile-Time Resource Safety for GPU APIs: A Low-Overhead Typestate Framework

exa-AMD: Exascale Accelerated Materials Discovery

exa-AMD: An Exascale-Ready Framework for Accelerating the Discovery and Design of Functional Materials

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high performance computing on graphics processing units: hgpu.org

Programming

Accelerated Sparse Matrix Operations in Nonlinear Least Squares Solvers

Investigating Half Precision Arithmetic to Accelerate Dense Linear System Solvers

HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

A Hybrid-parallel Architecture for Applications in Bioinformatics

2D Image Convolution using Three Parallel Programming Models on the Xeon Phi

Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Vectorized algorithm for multidimensional Monte Carlo integration on modern GPU, CPU and MIC architectures

Scalable and massively parallel Monte Carlo photon transport simulations for heterogeneous computing platforms

Scalable Streaming Tools for Analyzing N-body Simulations: Finding Halos and Investigating Excursion Sets in One Pass

Recent source codes

Kernel Library for LLM Serving

Adaptivity in AdaptiveCpp: Optimizing Performance by Leveraging Runtime Information During JIT-Compilation

Neptune: Advanced ML Operator Fusion for Locality and Parallelism on GPUs

Genten: Software for Generalized Tensor Decompositions by Sandia National Laboratories

Interleaved Learning and Exploration: A Self-Adaptive Fuzz Testing Framework for MLIR

Pinocchio: PINpointing Orbit Crossing Collapsed Hierarchical Objects

KernelCoder: trained on a curated dataset of reasoning traces and CUDA kernel pairs

VibeCodeHPC - Multi Agentic Vibe Coding for HPC

Compile-Time Resource Safety for GPU APIs: A Low-Overhead Typestate Framework

exa-AMD: Exascale Accelerated Materials Discovery

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