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Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

Shaohuai Shi, Xiaowen Chu

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Tags: Algorithms, Benchmarking, Caffe, Computer science, CUDA, Deep learning, MPI, Neural networks, nVidia, Package, Performance, TensorFlow, Tesla P40, Torch

November 26, 2017 by hgpu

High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL

Ernst Joachim Houtgast, Vlad-Mihai Sima, Zaid Al-Ars

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Tags: Algorithms, Bioinformatics, Biology, FPGA, OpenCL, Smith-Waterman algorithm

November 26, 2017 by hgpu

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Stefan Rosenberger, Gundolf Haase

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 1060, OpenACC, OpenMP, Sparse matrix

November 21, 2017 by hgpu

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

Edans F. O. Sandes, George Teodoro, Alba C. M. A. Melo

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Tags: Algorithms, Computer science, CUDA, Databases, Filtering, nVidia, nVidia GeForce GTX 980 Ti

November 21, 2017 by hgpu

Vectorized algorithm for multidimensional Monte Carlo integration on modern GPU, CPU and MIC architectures

Przemyslaw Stpiczynski

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Tags: Algorithms, Computer science, Intel Xeon Phi, Monte Carlo integration, nVidia, OpenACC, OpenMP, Pseudo-random number generators, Tesla K40

November 12, 2017 by hgpu

Scalable and massively parallel Monte Carlo photon transport simulations for heterogeneous computing platforms

Leiming Yu, Fanny Nina-Paravecino, David Kaeli, Qianqian Fang

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Tags: Algorithms, AMD R9 Nano, AMD Radeon RX 480, ATI, Computational Physics, Heterogeneous systems, nVidia, nVidia GeForce GTX 1050 Ti, nVidia GeForce GTX 1080 Ti, nVidia GeForce GTX 590, nVidia GeForce GTX 980 Ti, nVidia GeForce GTX Titan X, OpenCL, Package, Physics

November 12, 2017 by hgpu

Scalable Streaming Tools for Analyzing N-body Simulations: Finding Halos and Investigating Excursion Sets in One Pass

Nikita Ivkin, Zaoxing Liu, Lin F. Yang, Srinivas Suresh Kumar, Gerard Lemson, Mark Neyrinck, Alexander S. Szalay, Vladimir Braverman, Tamas Budavari

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Tags: Algorithms, Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, nVidia GeForce GTX 1080, Tesla C2050, Tesla C2070

November 7, 2017 by hgpu

Automatic Scan Parallelization in OpenMP

Maicol Zegarra, Marcio Pereira, Xavier Martorell, Guido Araujo

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Tags: Algorithms, ARM, Computer science, CUDA, nVidia, OpenCL, OpenMP, Sorting, Tesla K40

October 31, 2017 by hgpu

An efficient GPU algorithm for tetrahedron-based Brillouin-zone integration

Daniel Guterding, Harald O. Jeschke

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Tags: Algorithms, Computational Physics, CUDA, nVidia, nVidia GeForce GTX 970, Physics

October 31, 2017 by hgpu

Parallel Matching and Clustering Algorithms on GPUs

Md. Naim

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Tags: Algorithms, Clustering, Computer science, CUDA, nVidia, Tesla K40, Thesis

October 21, 2017 by hgpu

Computation of gray-level co-occurrence matrix based on CUDA and its optimization

Huichao Hong, Lixin Zheng, Shuwan Pan

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 1050 Ti, Performance

October 21, 2017 by hgpu

Accelerating Genomics Research with OpenCL and FPGAs

Chris Rauer, George S. Powley, Mir Ahsan, Nicholas Finamore

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Tags: Algorithms, Biology, Computer science, FPGA, Genomics, OpenCL

October 15, 2017 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

Programming

Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

Vectorized algorithm for multidimensional Monte Carlo integration on modern GPU, CPU and MIC architectures

Scalable and massively parallel Monte Carlo photon transport simulations for heterogeneous computing platforms

Scalable Streaming Tools for Analyzing N-body Simulations: Finding Halos and Investigating Excursion Sets in One Pass

Automatic Scan Parallelization in OpenMP

An efficient GPU algorithm for tetrahedron-based Brillouin-zone integration

Parallel Matching and Clustering Algorithms on GPUs

Computation of gray-level co-occurrence matrix based on CUDA and its optimization

Accelerating Genomics Research with OpenCL and FPGAs

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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