high performance computing on graphics processing units: hgpu.org

Laksono Adhianto, Jonathon Anderson, Robert Matthew Barnett, Dragana Grbic, Vladimir Indic, Mark Krentel, Yumeng Liu, Srdan Milakovíc, Wileam Phan, John Mellor-Crumme

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Tags: AMD Radeon Instinct MI300A, ATI, Computer science, CUDA, HPC, MPI, OpenCL, Package, Performance

September 15, 2024 by hgpu

DNA sequence alignment: An assignment for OpenMP, MPI, and CUDA/OpenCL

Arturo Gonzalez-Escribano, Diego García-Álvarez, Jesús Cámara

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Tags: Bioinformatics, Biology, CUDA, MPI, nVidia, nVidia A100, nVidia GeForce GTX Titan X, nVidia GeForce RTX 4050, OpenCL, Optimization, Sequence alignment

September 15, 2024 by hgpu

Optimizing the Weather Research and Forecasting Model with OpenMP Offload and Codee

Chayanon (Namo)Wichitrnithed, Woo-Sun-Yang, Yun (Helen)He, Brad Richardson, Koichi Sakaguchi, Manuel Arenaz, William I. Gustafson Jr., Jacob Shpund, Ulises Costi Blanco, Alvaro Goldar Dieste

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Tags: Computer science, CUDA, Fortran, MPI, nVidia, nVidia A100, OpenMP, Optimization, Package, Weather prediction

September 15, 2024 by hgpu

VitBit: Enhancing Embedded GPU Performance for AI Workloads through Register Operand Packing

Jaebeom Jeon, Minseong Gil, Junsu Kim, Jaeyong Park, Gunjae Koo, Myung Kuk Yoon, Yunho Oh

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Tags: AI, Artificial intelligence, Computer science, CUDA, Deep learning, Neural networks, nVidia, nVidia Jetson AGX Orin, Performance

September 1, 2024 by hgpu

Exploring Scalability in C++ Parallel STL Implementations

Ruben Laso, Diego Krupitza, Sascha Hunold

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Tags: Benchmarking, Computer science, CUDA, nVidia, nVidia Ampere A2, OpenMP, Package, Performance, Tesla T4

September 1, 2024 by hgpu

A Parallel Compression Pipeline for Improving GPU Virtualization Data Transfers

Cristian Peñaranda, Carlos Reaño, Federico Silla

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Tags: Compression, Computer science, CUDA, Deep learning, nVidia, nVidia A100, Package, Virtualization

September 1, 2024 by hgpu

Owl: Differential-based Side-Channel Leakage Detection for CUDA Applications

Yu Zhao, Wenjie Xue, Weijie Chen, Weizhong Qiang, Deqing Zou, Hai Jin

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Tags: Computer science, CUDA, nVidia, nVidia RTX A4000, Package, Security

September 1, 2024 by hgpu

Exploring GPU-to-GPU Communication: Insights into Supercomputer Interconnects

Daniele De Sensi, Lorenzo Pichetti, Flavio Vella, Tiziano De Matteis, Zebin Ren, Luigi Fusco, Matteo Turisini, Daniele Cesarini, Kurt Lust, Animesh Trivedi, Duncan Roweth, Filippo Spiga, Salvatore Di Girolamo, Torsten Hoefler

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Tags: AMD Radeon Instinct MI250X, ATI, Benchmarking, Computer science, CUDA, HPC, MPI, nVidia, nVidia A100, nVidia H100, Performance

September 1, 2024 by hgpu

high performance computing on graphics processing units: hgpu.org

Applications

RenderKernel: High-level programming for real-time rendering systems

A Study of Performance Programming of CPU, GPU accelerated Computers and SIMD Architecture

Optimal Workload Placement on Multi-Instance GPUs

Enhancing Code Portability, Problem Scale, and Storage Efficiency in Exascale Applicationsin Exascale Applications

Refining HPCToolkit for application performance analysis at exascale

DNA sequence alignment: An assignment for OpenMP, MPI, and CUDA/OpenCL

Optimizing the Weather Research and Forecasting Model with OpenMP Offload and Codee

VitBit: Enhancing Embedded GPU Performance for AI Workloads through Register Operand Packing

Exploring Scalability in C++ Parallel STL Implementations

A Parallel Compression Pipeline for Improving GPU Virtualization Data Transfers

Owl: Differential-based Side-Channel Leakage Detection for CUDA Applications

Exploring GPU-to-GPU Communication: Insights into Supercomputer Interconnects

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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