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HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

Nilay Khare, Alind Khare and Farhan Khan

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Tags: Algorithms, Bioinformatics, Biology, BLAST, CUDA, Hadoop, nVidia, nVidia Quadro 2000, nVidia Quadro 600, Tesla C2075

December 3, 2017 by hgpu

Methods for GPU Acceleration of Big Data Applications

Reza Mokhtari

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Tags: big data, Computer science, CUDA, nVidia, nVidia GeForce GTX 680, nVidia GeForce GTX Titan Black, Thesis

December 3, 2017 by hgpu

A Hybrid-parallel Architecture for Applications in Bioinformatics

Jan Christian Kassens

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Tags: Algorithms, Bioinformatics, Biology, Computer science, CUDA, FPGA, nVidia, nVidia GeForce GTX 780 Ti, Thesis

December 3, 2017 by hgpu

Implementing implicit OpenMP data sharing on GPUs

Gheorghe-Teodor Bercea, Carlo Bertolli, Arpith C. Jacob, Alexandre Eichenberger, Alexey Bataev, Georgios Rokos, Hyojin Sung, Tong Chen, Kevin O'Brien

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Tags: Computer science, CUDA, LLVM, Memory model, nVidia, OpenMP, Programming Languages, PTX, Tesla K40, Tesla P100

November 30, 2017 by hgpu

Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

Shaohuai Shi, Xiaowen Chu

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Tags: Algorithms, Benchmarking, Caffe, Computer science, CUDA, Deep learning, MPI, Neural networks, nVidia, Package, Performance, TensorFlow, Tesla P40, Torch

November 26, 2017 by hgpu

Computing the distance between two finite element solutions defined on different 3D meshes on a GPU

Maxence Reberol, Bruno Levy

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Tags: Computer science, nVidia, nVidia GeForce GTX 1080, OpenGL, Package, Traingular meshes

November 26, 2017 by hgpu

Efficient Target and Application Specific Selection and Ordering of Compiler Passes

Ricardo Jorge Ferreira Nobre

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Tags: Code generation, Compilers, Computer science, CUDA, Design space exploration, nVidia, nVidia GeForce GT 650 M, nVidia GeForce GTX 460, nVidia GeForce GTX 480, OpenCL, PTX, Thesis

November 26, 2017 by hgpu

GPU Pro 7: Advanced Rendering

Wolfgang Engel (editor)

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Tags: 3D Graphics and Realism, Book, Computer science, CUDA, DirectCompute, DirectX, nVidia, OpenGL, Package, Rendering, Visualization

November 26, 2017 by hgpu

A survey on graphic processing unit computing for large-scale data mining

Alberto Cano

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Tags: Computer science, CUDA, Data mining, Distributed computing, Machine learning, nVidia

November 21, 2017 by hgpu

Compiling and Optimizing OpenMP 4.X Programs to OpenCL and SPIR

Marcio M. Pereira, Rafael C. F. Sousa, Guido Araujo

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Tags: ARM, Code generation, Compilers, Computer science, FPGA, Heterogeneous systems, LLVM, nVidia, OpenCL, OpenMP, Package, Tesla K40

November 21, 2017 by hgpu

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

Edans F. O. Sandes, George Teodoro, Alba C. M. A. Melo

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Tags: Algorithms, Computer science, CUDA, Databases, Filtering, nVidia, nVidia GeForce GTX 980 Ti

November 21, 2017 by hgpu

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Stefan Rosenberger, Gundolf Haase

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 1060, OpenACC, OpenMP, Sparse matrix

November 21, 2017 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

Methods for GPU Acceleration of Big Data Applications

A Hybrid-parallel Architecture for Applications in Bioinformatics

Implementing implicit OpenMP data sharing on GPUs

Performance Modeling and Evaluation of Distributed Deep Learning Frameworks on GPUs

Computing the distance between two finite element solutions defined on different 3D meshes on a GPU

Efficient Target and Application Specific Selection and Ordering of Compiler Passes

GPU Pro 7: Advanced Rendering

A survey on graphic processing unit computing for large-scale data mining

Compiling and Optimizing OpenMP 4.X Programs to OpenCL and SPIR

Bitmap Filter: Speeding up Exact Set Similarity Joins with Bitwise Operations

GPU Parallelization for Unstructured Sparse Matrix Problems with OpenMP 4.5 and OpenACC

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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