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GPU Accelerated Pattern Matching Algorithm for DNA Sequences to Detect Cancer using CUDA

Snehal P. Adey

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Tags: Bioinformatics, Biology, CUDA, Medicine, nVidia, Tesla C2070, Thesis

August 7, 2013 by hgpu

Automatic Skeleton-Based Compilation through Integration with an Algorithm Classification

Cedric Nugteren, Pieter Custers, Henk Corporaal

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Tags: Code generation, Compilers, Computer science, CUDA, nVidia, nVidia GeForce GTX 470, OpenCL, OpenMP

August 7, 2013 by hgpu

2D Triangulation of Polygons on CUDA

Shadi Alawneh, Dennis Peters

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 7900 GTX

August 6, 2013 by hgpu

Portable Parallel Kernels for High-Speed Beamforming in Synthetic Aperture Ultrasound Imaging

Joao Amaro, Gabriel Falcao, Billy Y. S. Yiu, Alfred C. H. Yu

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Tags: Algorithms, ATI, ATI Radeon HD 6970, nVidia, OpenCL, Signal processing, Tesla C1060, Ultrasound

August 6, 2013 by hgpu

Efficient bayesian multi-view deconvolution

Stephan Preibisch, Fernando Amat, Evangelia Stamataki, Mihail Sarov, Eugene Myers, Pavel Tomancak

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Tags: Bayesian, Biology, CUDA, Microscopy, nVidia, nVidia Quadro 4000, Package

August 6, 2013 by hgpu

GPU Acceleration of Graph Matching, Clustering, and Partitioning

Bastiaan Onne Fagginger Auer

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Tags: Algorithms, Clustering, Computer science, CUDA, Graph theory, nVidia, Sparse matrix, Tesla C2075, Thesis

August 6, 2013 by hgpu

GPU Programming in Functional Languages: A Comparison of Haskell GPU Embedded Domain Specific Languages

C. Ouwehand, P. Hijma, W.J. Fokkink

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Tags: Computer science, CUDA, Haskell, Matrix multiplication, nVidia, nVidia GeForce GTX 480

August 6, 2013 by hgpu

An Ultra-Fast, Optimized and Massively-Parallelized Curvelet Transform Algorithm on GP-GPUs

Mohammad Motamedi, Sima Sobhieh, S. Ahmad Motamedi, Amir Hossein Rezaie

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Tags: Algorithms, CUDA, Image processing, nVidia, nVidia GeForce GT 210

August 5, 2013 by hgpu

Attack Signature Matching using Graphics Processors in High-Performance Intrusion Detection Systems

Payam Mahdinia, Mehdi Berenjkoob, Hedayat Vatankhah

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Tags: Computer science, CUDA, Network communications, nVidia, nVidia GeForce GTX 590, Security

August 5, 2013 by hgpu

Simulating a Family of Tissue P Systems Solving SAT on the GPU

Miguel A. Martinez-del-Amor, Jesus Perez-Carrasco, Mario J. Perez-Jimenez

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Tags: Computer science, CUDA, Membrane computing, nVidia, Package, SAT, Tesla C1060

August 5, 2013 by hgpu

Ray Tracing in the Cloud using MapReduce

Lesley Northam, Khuzaima Daudjee, Rob Smits, Joe Istead

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Tags: Cloud, Computer science, CUDA, Hadoop, MapReduce, nVidia, Raytracing, Rendering

August 5, 2013 by hgpu

Strategies for Optimization of Parallel Programs

Alcides Fonseca

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 285, OpenCL, Optimization, Thesis

August 3, 2013 by hgpu

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

Introduction to Computer Vision

ACT: Accelerator Compiler Toolkit

Automatically Generating ML Compiler Backends from Tensor Accelerator ISA Descriptions

Accelerating the Mitigation of LLM Inference Nondeterminism Across GPU Architectures

pytest-gpu-proof: A Simple Pytest Extension for Local GPU Code Testing

pytest-gpu-proof: Enabling Cloud-CPU Continuous Integration for GPU Code with Local GPU Attestation

nvsass-disassembler

Automated Instruction Encoding Synthesis for Modern GPU ISA Compression

PrefixBench-H100: Characterizing Prefix Reuse and Time-to-First-Token in H100 LLM Serving

AutoTuneBench: Trustworthy Measurement for Agent Auto-Tuning of LLM Serving Engines

EinsummableV3 - graph-based computation with tensor operations support

Every Kernel Is a Join: Automatic Multi-GPU Parallelism for AI Computations in Einsummable

MaxKernel: Intelligent TPU Kernel Engineering Agents

MaxKernel: Agentic Kernel Generation for TPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

GPU Accelerated Pattern Matching Algorithm for DNA Sequences to Detect Cancer using CUDA

Automatic Skeleton-Based Compilation through Integration with an Algorithm Classification

2D Triangulation of Polygons on CUDA

Portable Parallel Kernels for High-Speed Beamforming in Synthetic Aperture Ultrasound Imaging

Efficient bayesian multi-view deconvolution

GPU Acceleration of Graph Matching, Clustering, and Partitioning

GPU Programming in Functional Languages: A Comparison of Haskell GPU Embedded Domain Specific Languages

An Ultra-Fast, Optimized and Massively-Parallelized Curvelet Transform Algorithm on GP-GPUs

Attack Signature Matching using Graphics Processors in High-Performance Intrusion Detection Systems

Simulating a Family of Tissue P Systems Solving SAT on the GPU

Strategies for Optimization of Parallel Programs

Recent source codes

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

Introduction to Computer Vision

ACT: Accelerator Compiler Toolkit

Accelerating the Mitigation of LLM Inference Nondeterminism Across GPU Architectures

pytest-gpu-proof: A Simple Pytest Extension for Local GPU Code Testing

nvsass-disassembler

PrefixBench-H100: Characterizing Prefix Reuse and Time-to-First-Token in H100 LLM Serving

AutoTuneBench: Trustworthy Measurement for Agent Auto-Tuning of LLM Serving Engines

EinsummableV3 - graph-based computation with tensor operations support

MaxKernel: Intelligent TPU Kernel Engineering Agents

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