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Tinker-HP: Accelerating Molecular Dynamics Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields using GPUs and Multi-GPUs systems

Olivier Adjoua, Louis Lagardère, Luc-Henri Jolly, Arnaud Durocher, Thibaut Very, Isabelle Dupays, Zhi Wang, Théo Jaffrelot Inizan, Frédéric Célerse, Pengyu Ren, Jay W. Ponder, Jean-Philip Piquemal

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Tags: Biophysics, Computational Physics, CUDA, Molecular dynamics, nVidia, nVidia DGX-A100, OpenACC, Package, Physics, Tesla V100

November 8, 2020 by hgpu

Towards Co-execution on Commodity Heterogeneous Systems: Optimizations for Time-Constrained Scenarios

Raúl Nozal, Jose Luis Bosque, Ramon Beivide

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Tags: AMD Radeon R7, ATI, Computer science, Heterogeneous systems, load balancing, nVidia, nVidia GeForce GTX 950, OpenCL, Package, performance portability, Task scheduling

November 1, 2020 by hgpu

Out-of-core Training for Extremely Large-Scale Neural Networks With Adaptive Window-Based Scheduling

Akio Hayakawa, Takuya Narihira

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Tags: Algorithms, Computer science, CUDA, Deep learning, Neural networks, nVidia, Package, Tesla V100

November 1, 2020 by hgpu

Memory Optimization for Deep Networks

Aashaka Shah, Chao-Yuan Wu, Jayashree Mohan, Vijay Chidambaram, Philipp Krähenbühl

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Tags: Computer science, CUDA, Deep learning, Memory, nVidia, Optimization, Package, PyTorch, Tesla P100

November 1, 2020 by hgpu

FlowPM: Distributed TensorFlow Implementation of the FastPM Cosmological N-body Solver

Chirag Modi, Francois Lanusse, Uros Seljak

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Tags: Astrophysics, Cosmology, CUDA, N-body simulation, nVidia, Package, Physics, TensorFlow, Tesla V100

October 25, 2020 by hgpu

A Tensor Compiler for Unified Machine Learning Prediction Serving

Supun Nakandala Karla Saur, Gyeong-In Yu, Konstantinos Karanasos, Carlo Curino, Markus Weimer, Matteo Interlandi

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Tags: Computer science, CUDA, Machine learning, nVidia, Package, Tesla K80, Tesla P100

October 18, 2020 by hgpu

Deep Learning for Digital Asset Limit Order Books

Rakshit Jha, Mattijs De Paepe, Samuel Holt, James West, Shaun Ng

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Tags: Deep learning, Finance, Package, Python

October 11, 2020 by hgpu

Bempp-cl: A fast Python based just-in-time compiling boundary element library

Timo Betcke, Matthew W. Scroggs

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Tags: Computer science, Differential equations, Integral equations, OpenCL, Package, Partial differential equations, PDEs, Python

October 11, 2020 by hgpu

Mastering Atari with Discrete World Models

Danijar Hafner, Timothy Lillicrap, Mohammad Norouzi, Jimmy Ba

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Tags: Artificial intelligence, Computer science, Deep learning, Machine learning, nVidia, Package, Python, TensorFlow, Tesla V100

October 11, 2020 by hgpu

Transparent Acceleration of Java-based Deep Learning Engines

Athanasios Stratikopoulos, Mihai-Cristian Olteanu, Ian Vaughan, Zoran Sevarac, Nikos Foutris, Juan Fumero, Christos Kotselidis

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Tags: AMD RX Vega 64, ATI, Computer science, Computer vision, Deep learning, Java, nVidia, nVidia GeForce GTX 1050 Ti, OpenCL, Package

October 4, 2020 by hgpu

LoopBench: An Evaluation of Loop Acceleration in Heterogeneous Systems

Saman Biookaghazadeh, Fengbo Ren, Ming Zhao

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Tags: Benchmarking, Computer science, CUDA, FPGA, Heterogeneous systems, OpenCL, Package

October 4, 2020 by hgpu

Flexible Performant GEMM Kernels on GPUs

Thomas Faingnaert, Tim Besard, Bjorn De Sutter

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Tags: Computer science, CUBLAS, CUDA, Julia, Machine learning, Mathematical Software, Matrix multiplication, Mixed precision, nVidia, nVidia GeForce RTX 2080 Ti, Package, Performance

October 4, 2020 by hgpu

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

Shamrock: Multi-GPU hydrodynamics for astrophysics

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

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high performance computing on graphics processing units: hgpu.org

Tinker-HP: Accelerating Molecular Dynamics Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields using GPUs and Multi-GPUs systems

Towards Co-execution on Commodity Heterogeneous Systems: Optimizations for Time-Constrained Scenarios

Out-of-core Training for Extremely Large-Scale Neural Networks With Adaptive Window-Based Scheduling

Memory Optimization for Deep Networks

FlowPM: Distributed TensorFlow Implementation of the FastPM Cosmological N-body Solver

A Tensor Compiler for Unified Machine Learning Prediction Serving

Deep Learning for Digital Asset Limit Order Books

Bempp-cl: A fast Python based just-in-time compiling boundary element library

Mastering Atari with Discrete World Models

Transparent Acceleration of Java-based Deep Learning Engines

LoopBench: An Evaluation of Loop Acceleration in Heterogeneous Systems

Flexible Performant GEMM Kernels on GPUs

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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