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SIML: A Fast SIMD Algorithm for Calculating LINGO Chemical Similarities on GPUs and CPUs

Imran S. Haque, Vijay S. Pande, W. Patrick Walters

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Tags: Chemistry, CUDA, nVidia, nVidia GeForce GTS 250, OpenMP, Package, Tesla T10

November 9, 2010 by hgpu

An exploration of CUDA and CBEA for a gravitational wave source-modelling application

Gaurav Khanna, Justin McKennon

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Tags: Cell processor, CUDA, General Relativity and Quantum Cosmology, Gravitation, nVidia, Physics, Tesla C1060

November 9, 2010 by hgpu

Teraflop per second gravitational lensing ray-shooting using graphics processing units

Alexander C. Thompson, Christopher J. Fluke, David G. Barnes, Benjamin R. Barsdell

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Tags: Astrophysics, Cosmology and Extragalactic Astrophysics, CUDA, Gravitational lensing, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce 8800 GT, Tesla S1070

November 9, 2010 by hgpu

High Performance Direct Gravitational N-body Simulations on Graphics Processing Units: An implementation in CUDA (thesis)

Jeroen Bedorf

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Tags: Astrophysics, CUDA, Gravitation, N-body simulation, nVidia, nVidia GeForce 8800 GTX, Package, Stellar dynamics

November 9, 2010 by hgpu

Running the NIM Next-Generation Weather Model on GPUs

Mark W. Govett, Jacques Middlecoff, Tom Henderson

Tags: CUDA, Earth and Space Sciences, nVidia, Weather Prediction Model

November 9, 2010 by hgpu

Fast and informative flow simulations in a building by using fast fluid dynamics model on graphics processing unit

Wangda Zuo, Qingyan Chen

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Tags: CUDA, Fluid dynamics, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 8800 GTX

November 9, 2010 by hgpu

Gravitational tree-code on graphics processing units: implementation in CUDA

Evghenii Gaburov, Jeroen Bedorf, Simon P. Zwart

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce 8800 Ultra, Package, Physics

November 9, 2010 by hgpu

Efficient pseudo-random number generators for biomolecular simulations on graphics processors

A. Zhmurov, K. Rybnikov, Y. Kholodov, V. Barsegov

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Tags: Biological Physics, Chemical Physics, CUDA, nVidia, nVidia GeForce GTX 295, Physics, Pseudo-random number generators

November 9, 2010 by hgpu

Massively parallel differential evolution-pattern search optimization with graphics hardware acceleration: an investigation on bound constrained optimization problems

Weihang Zhu

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Tags: Computer science, CUDA, Differential evolution, Finance, nVidia, nVidia GeForce GTX 280, Pattern Search

November 9, 2010 by hgpu

ABC-SysBio–approximate Bayesian computation in Python with GPU support

Juliane Liepe, Chris Barnes, Erika Cule, Kamil Erguler, Paul Kirk, Tina Toni, Michael P. H. Stumpf

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Python

November 9, 2010 by hgpu

DiVinE-CUDA – A Tool for GPU Accelerated LTL Model Checking

Jiri Barnat, Lubos Brim, Milan Ceska

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Tags: Computer science, CUDA, Distributed computing, nVidia, nVidia GeForce GTX 280, Software Engineering

November 9, 2010 by hgpu

Solving $k$-Nearest Vector Problem on Multiple Graphics Processors

Kimikazu Kato, Tikara Hosino

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Tags: Computer science, CUDA, Data Structures and Algorithms, Information Retrieval, Neural and Evolutionary Computing, nVidia, nVidia GeForce GTX 280

November 8, 2010 by hgpu

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

Faial: finds bugs in CUDA kernels

Sound and Partially-Complete Static Analysis of Data-Races in GPU Programs

Effects of OpenCL-Based Parallelization Methods on Explicit Numerical Methods to Solve the Heat Equation

UVaFTLE: Lagrangian finite time Lyapunov exponent extraction for fluid dynamic applications

Challenging Portability Paradigms: FPGA Acceleration Using SYCL and OpenCL

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high performance computing on graphics processing units: hgpu.org

SIML: A Fast SIMD Algorithm for Calculating LINGO Chemical Similarities on GPUs and CPUs

An exploration of CUDA and CBEA for a gravitational wave source-modelling application

Teraflop per second gravitational lensing ray-shooting using graphics processing units

High Performance Direct Gravitational N-body Simulations on Graphics Processing Units: An implementation in CUDA (thesis)

Running the NIM Next-Generation Weather Model on GPUs

Fast and informative flow simulations in a building by using fast fluid dynamics model on graphics processing unit

Gravitational tree-code on graphics processing units: implementation in CUDA

Efficient pseudo-random number generators for biomolecular simulations on graphics processors

Massively parallel differential evolution-pattern search optimization with graphics hardware acceleration: an investigation on bound constrained optimization problems

ABC-SysBio–approximate Bayesian computation in Python with GPU support

DiVinE-CUDA – A Tool for GPU Accelerated LTL Model Checking

Solving $k$-Nearest Vector Problem on Multiple Graphics Processors

Recent source codes

EnergyUCB-Bandit

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

Faial: finds bugs in CUDA kernels

Effects of OpenCL-Based Parallelization Methods on Explicit Numerical Methods to Solve the Heat Equation

Intel® SHMEM: Device initiated shared memory based communication library

miniLB: Lattice Botlzmann miniapp w/SYCL

AFOCL

2domination

MFC: Exascale simulation of multiphase/physics fluid dynamics

UVaFTLE: Lagrangian finite time Lyapunov exponent extraction for fluid dynamic applications

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