Andreas Adelmann, Uldis Locans, Andreas Suter
Emerging processor architectures such as GPUs and Intel MICs provide a huge performance potential for high performance computing. However developing software using these hardware accelerators introduces additional challenges for the developer such as exposing additional parallelism, dealing with different hardware designs and using multiple development frameworks in order to use devices from different vendors. The […]
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Joshua A. Anderson, M. Eric Irrgang, Sharon C. Glotzer
We design and implement HPMC, a scalable hard particle Monte Carlo simulation toolkit, and release it open source as part of HOOMD-blue. HPMC runs in parallel on many CPUs and many GPUs using domain decomposition. We employ BVH trees instead of cell lists on the CPU for fast performance, especially with large particle size disparity, […]
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Avtech Scientific
Advanced Simulation Library is a free and open source multiphysics simulation software package and a tool for solving Partial Differential Equations. It has significant user base across many areas of engineering and science, from both industrial and academic organizations. ASL utilizes only the methods that allow efficient parallelization: Lattice Boltzmann Methods, Explicit Finite Difference, Matrix […]
V.N. Pomerantsev, V.I. Kukulin, O.A. Rubtsova, S.K. Sakhiev
A principally novel approach towards solving the few-particle (many-dimensional) quantum scattering problems is described. The approach is based on a complete discretization of few-particle continuum and usage of massively parallel computations of integral kernels for scattering equations by means of GPU. The discretization for continuous spectrum of a few-particle Hamiltonian is realized with a projection […]
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Jens Glaser, Andrew S. Karas, Sharon C. Glotzer
We present an algorithm to simulate the many-body depletion interaction between anisotropic colloids in an implicit way, integrating out the degrees of freedom of the depletants, which we treat as an ideal gas. Because the depletant particles are statistically independent and the depletion interaction is short-ranged, depletants are randomly inserted in parallel into the excluded […]
C. A. Navarro, Huang Wei, Youjin Deng
The study of disordered spin systems through Monte Carlo simulations has proven to be a hard task due to the adverse energy landscape present at the low temperature regime, making it difficult for the simulation to escape from a local minimum. Replica based algorithms such as the Exchange Monte Carlo (also known as parallel tempering) […]
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Ursula Iturraran-Viveros, Miguel Molero-Armenta
Graphics processing units (GPUs) have become increasingly powerful in recent years. Programs exploring the advantages of this architecture could achieve large performance gains and this is the aim of new initiatives in high performance computing. The objective of this work is to develop an efficient tool to model 2D elastic wave propagation on parallel computing […]
Zhao Li, Jian Wang, Qi-Shu Yan, Xiaoran Zhao
Feynman loop integral is the key ingredient of high order radiation effect, which is responsible for reliable and accurate theoretical prediction. We improve the efficiency of numerical integration in sector decomposition by implementing quasi-Monte Carlo method associated with the technique of CUDA/GPU. For demonstration we present the results of several Feynman integrals up to two […]
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Xavier Saez, Alejandro Soba, Edilberto Sanchez, Mervi Mantsinen, Jose M. Cela
PIC methods are one of the most used methods in plasma simulations. We present a comprehensible evaluation of the PIC code performance on four current parallel platforms: IBM PowerPC, Intel Nehalem (SMP), Intel Sandy Bridge (SMP) and ARM GPU. The behavior of computational algorithms and data structures are analyzed to deduce which code optimizations will […]
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T. Takaki, R. Rojas, M Ohno, T. Shimokawabe, T. Aoki
A GPU code has been developed for a phase-field lattice Boltzmann (PFLB) method, which can simulate the dendritic growth with motion of solids in a dilute binary alloy melt. The GPU accelerated PFLB method has been implemented using CUDA C. The equiaxed dendritic growth in a shear flow and settling condition have been simulated by […]
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Mu Wang, John F. Brady
In this work we develop the Spectral Ewald Accelerated Stokesian Dynamics (SEASD), a novel computational method for dynamic simulations of polydisperse colloidal suspensions with full hydrodynamic interactions. SEASD is based on the framework of Stokesian Dynamics (SD) with extension to compressible solvents, and uses the Spectral Ewald (SE) method [Lindbo & Tornberg, J. Comput. Phys. […]
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J. Sa, B. Noh, H. Kim, D. Choi, S. Lee, Y. Chung, D. Kim, H. Jang
Recently, many particle physics applications can be parallelized by using multicore platforms such as CPU and GPU. In this paper, we propose a parallel processing approach for Quantum ChromoDynamics(QCD) application by using both CPU and GPU. Instead of distributing the parallelizable workload to either CPU or GPU, we distribute the workload simultaneously into both CPU […]
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