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Communication Architectures for Scalable GPU-centric Computing Systems

Benjamin Klenk

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Heterogeneous systems, nVidia, Tesla K20, Thesis

January 28, 2018 by hgpu

A Survey on Compiler Autotuning using Machine Learning

Amir H. Ashouri, William Killian, John Cavazos, Gianluca Palermo, Cristina Silvano

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Tags: Auto-Tuning, Compilers, Computer science, Machine learning, Performance

January 28, 2018 by hgpu

Improving Communication Performance in GPU-Accelerated HPC Clusters

Iman Faraji

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Tags: Computer science, CUDA, GPU cluster, MPI, nVidia, Package, Performance, Thesis

January 28, 2018 by hgpu

Scheduling Parallel Tasks under Multiple Resources: List Scheduling vs. Pack Scheduling

Hongyang Sun, Redouane Elghazi, Ana Gainaru, Guillaume Aupy, Padma Raghavan

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Tags: Computer science, Intel Xeon Phi, Performance, Task scheduling

January 20, 2018 by hgpu

Comprehensive Optimization of Parametric Kernels for Graphics Processing Units

Xiaohui Chen, Marc Moreno-Maza, Jeeva Paudel, Ning Xie

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Tags: Code generation, Computer science, CUDA, LLVM, nVidia, Package, Performance, PTX, Symbolic Computation, Tesla M2050

January 20, 2018 by hgpu

SuperNeurons: Dynamic GPU Memory Management for Training Deep Neural Networks

Linnan Wang, Jinmian Ye, Yiyang Zhao, Wei Wu, Ang Li, Shuaiwen Leon Song, Zenglin Xu, Tim Kraska

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Tags: Computer science, CUDA, Deep learning, Machine learning, Neural networks, nVidia, Tesla K40

January 20, 2018 by hgpu

Fast and Flexible GPU Accelerated Binding Free Energy Calculations within the AMBER Molecular Dynamics Package

Daniel J. Mermelstein, Charles Lin, Gard Nelson, Rachael Kretsch, J. Andrew McCammon, Ross C. Walker

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Tags: Algorithms, Bioinformatics, Biology, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 1080 Ti, nVidia GeForce GTX Titan X

January 20, 2018 by hgpu

Evaluation of Machine Learning Fameworks on Finis Terrae II

Andres Gomez Tato

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Deep learning, Machine learning, nVidia, Performance, Tesla K80

January 20, 2018 by hgpu

ImageCL: Language and source-to-source compiler for performance portability, load balancing, and scalability prediction on heterogeneous systems

Thomas L. Falch, Anne C. Elster

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Tags: ATI, ATI Radeon HD 7970, Compilers, Heterogeneous systems, Image processing, Machine learning, nVidia, nVidia GeForce GTX 960, OpenCL, Package, performance portability, Tesla K40

January 13, 2018 by hgpu

Graph Processing on GPUs: A Survey

Xuanhua Shi, Zhigao Zheng, Yongluan Zhou, Hai Jin, Ligang He, Bo Liu, Qiang-Sheng Hua

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Tags: Computer science, CUDA, Graph theory, nVidia, OpenCL, survey

January 13, 2018 by hgpu

pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment

Sven Warris, N. Roshan N. Timal, Marcel Kempenaar, Arne M. Poortinga, Henri van de Geest, Ana L. Varbanescu, Jan-Peter Nap

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 1070, OpenCL, Package, Python, Sequence alignment, Smith-Waterman algorithm

January 13, 2018 by hgpu

High Performance Stencil Code Generation with Lift

Bastian Hagedorn, Larisa Stoltzfus, Michel Steuwer, Sergei Gorlatch, Christophe Dubach

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Tags: ARM, ATI, ATI Radeon HD 7970, Code generation, Compilers, Computer science, Linear Algebra, nVidia, OpenCL, Package, performance portability, Scala, Tesla K20

January 13, 2018 by hgpu

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

LLOR: Automatic Repair of OpenMP Programs

LLOR: Automated Repair of OpenMP Programs

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high performance computing on graphics processing units: hgpu.org

Applications

Communication Architectures for Scalable GPU-centric Computing Systems

A Survey on Compiler Autotuning using Machine Learning

Improving Communication Performance in GPU-Accelerated HPC Clusters

Scheduling Parallel Tasks under Multiple Resources: List Scheduling vs. Pack Scheduling

Comprehensive Optimization of Parametric Kernels for Graphics Processing Units

SuperNeurons: Dynamic GPU Memory Management for Training Deep Neural Networks

Fast and Flexible GPU Accelerated Binding Free Energy Calculations within the AMBER Molecular Dynamics Package

Evaluation of Machine Learning Fameworks on Finis Terrae II

ImageCL: Language and source-to-source compiler for performance portability, load balancing, and scalability prediction on heterogeneous systems

Graph Processing on GPUs: A Survey

pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment

High Performance Stencil Code Generation with Lift

Recent source codes

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

LLOR: Automatic Repair of OpenMP Programs

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