high performance computing on graphics processing units: hgpu.org

Dong He, Supun Nakandala, Dalitso Banda, Rathijit Sen, Karla Saur, Kwanghyun Park, Carlo Curino, Jesús Camacho-Rodríguez, Konstantinos Karanasos, Matteo Interlandi

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Tags: Benchmarking, Cloud, Computer science, CUDA, Databases, Machine learning, nVidia, Package, Tesla P100

March 6, 2022 by hgpu

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Shenggan Cheng, Ruidong Wu, Zhongming Yu, Binrui Li, Xiwen Zhang, Jian Peng, Yang You

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Tags: Biology, Computer science, CUDA, Machine learning, nVidia, nVidia A100, Package

March 6, 2022 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Applications

Data transfer optimizations for heterogeneous managed runtime systems

Migrating CUDA to oneAPI: A Smith-Waterman Case Study

Managing Extreme Heterogeneity in Next Generation HPC Systems

Machine Learning for CUDA+MPI Design Rules

DISTAL: The Distributed Tensor Algebra Compiler

Concurrent CPU-GPU Task Programming using Modern C++

Benchmarking a Proof-of-Concept Performance Portable SYCL-based Fast Fourier Transformation Library

HipBone: A performance-portable GPU-accelerated C++ version of the NekBone benchmark

Integrating SkePU’s algorithmic skeletons with GPI on a cluster

Romou: Rapidly Generate High-Performance Tensor Kernels for Mobile GPUs

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR