high performance computing on graphics processing units: hgpu.org

Applications

hgpu.org » Applications

Accelerating Molecular Dynamics Simulations with GPUs

John Paul Walters, Vidyananth Balu, Vipin Chaudhary, David Kofke, Andrew Schultz

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Tags: Chemistry, CUDA, Molecular dynamics, Molecular simulation, nVidia, nVidia GeForce 8800 GTX

February 28, 2011 by hgpu

A Case Study for Petascale Applications in Astrophysics: Simulating Gamma-Ray Bursts

C. D. Ott, E. Schnetter, G. Allen, E. Seidel, J. Tao, B. Zink

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, nVidia, nVidia Quadro FX 5600

February 28, 2011 by hgpu

A general relativistic evolution code on CUDA architectures

Burkhard Zink

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Tags: Astrophysics, CUDA, Finite difference, Instrumentation and Methods for Astrophysics, nVidia, nVidia Quadro FX 5600

February 28, 2011 by hgpu

Scientific Visualization in Astronomy: Towards the Petascale Astronomy Era

Amr Hassan, Christopher J. Fluke

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Tags: Astrophysics, Instrumentation and Methods for Astrophysics, Review, Visualization

February 28, 2011 by hgpu

Bothnia: a dual-personality extension to the Intel integrated graphics driver

Gautham N. Chinya, Jamison D. Collins, Perry H. Wang, Hong Jiang, Guei Y. Lueh, Thomas A. Piazza, Hong Wang

Tags: Computer science, Intel, Intel GMA X3000, Programming techniques

February 28, 2011 by hgpu

Calculation by articificial compressibility method and virtual flux method on GPU

I. Tanno, K. Morinishi, N. Satofuka, Y. Watanabe

Tags: CUDA, Fluid dynamics, nVidia

February 28, 2011 by hgpu

STOCHSIMGPU: Parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB

Guido Klingbeil, Radek Erban, Mike Giles, Philip K. Maini

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Source codes

Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce 8800, Package, Stochastic simulation

February 28, 2011 by hgpu

Automatic data movement and computation mapping for multi-level parallel architectures with explicitly managed memories

Muthu Manikandan Baskaran, Uday Bondhugula, Sriram Krishnamoorthy, J. Ramanujam, Atanas Rountev, P. Sadayappan

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Tags: Algorithms, Code generation, Compilers, Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Optimization, Performance

February 28, 2011 by hgpu

Fast and Memory Efficient GPU-Based Rendering of Tensor Data

Mario Hlawitschka, Sebastian Eichelbaum, Gerik Scheuermann

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Tags: Computer science, OpenGL, Physics, Rendering, Visualization

February 27, 2011 by hgpu

Efficient hierarchical parallel genetic algorithms using grid computing

Dudy Lim, Yew-Soon Ong, Yaochu Jin, Bernhard Sendhoff, Bu-Sung Lee

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Tags: Algorithms, Computer science, Genetic programming, Grid

February 27, 2011 by hgpu

GPU ray casting of virtual globes

Patrick Cozzi, Frank Stoner

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Tags: 3D Graphics and Realism, Computer science, nVidia, nVidia GeForce 8400 GS, Rendering, Visualization

February 27, 2011 by hgpu

Data Mining and Machine Learning in Astronomy

Nicholas M. Ball, Robert J. Brunner

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Tags: Astrophysics, Cosmology and Extragalactic Astrophysics, CUDA, Data mining, Instrumentation and Methods for Astrophysics, nVidia, Review

February 27, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

Accelerating Molecular Dynamics Simulations with GPUs

A Case Study for Petascale Applications in Astrophysics: Simulating Gamma-Ray Bursts

A general relativistic evolution code on CUDA architectures

Scientific Visualization in Astronomy: Towards the Petascale Astronomy Era

Bothnia: a dual-personality extension to the Intel integrated graphics driver

Calculation by articificial compressibility method and virtual flux method on GPU

STOCHSIMGPU: Parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB

Automatic data movement and computation mapping for multi-level parallel architectures with explicitly managed memories

Fast and Memory Efficient GPU-Based Rendering of Tensor Data

Efficient hierarchical parallel genetic algorithms using grid computing

GPU ray casting of virtual globes

Data Mining and Machine Learning in Astronomy

Recent source codes

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

Gaia AVU-GSR

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Most viewed papers (last 30 days)