high performance computing on graphics processing units: hgpu.org

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hgpu.org » Applications

GPU-BLAST: Using graphics processors to accelerate protein sequence alignment

Panagiotis D. Vouzis, Nikolaos V. Sahinidis

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Tags: Bioinformatics, Biology, BLAST, CUDA, nVidia, Package, Sequence alignment, Tesla C2050

November 30, 2010 by hgpu

Shader algebra

Michael Mccool, Stefanus Du Toit, Tiberiu Popa, Bryan Chan, Kevin Moule

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Tags: 3D Graphics and Realism, Computer science, nVidia, OpenGL, Package, Rendering, Shaders

November 29, 2010 by hgpu

A flexible simulation framework for graphics architectures

J. W. Sheaffer, D. Luebke, K. Skadron

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Tags: Computer science, Energy-efficient computing, nVidia, nVidia GeForce 4, OpenGL, Package

November 29, 2010 by hgpu

StarPU: A Unified Platform for Task Scheduling on Heterogeneous Multicore Architectures

Cedric Augonnet, Samuel Thibault, Raymond Namyst, Pierre-Andre Wacrenier

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Tags: Computer science, CUDA, Distributed computing, nVidia, nVidia Quadro FX 4600, Package, Performance

November 28, 2010 by hgpu

Highly accelerated feature detection in proteomics data sets using modern graphics processing units

Rene Hussong, Barbara Gregorius, Andreas Tholey, Andreas Hildebrandt

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Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Tesla C870

November 28, 2010 by hgpu

Fast Disk Encryption through GPGPU Acceleration

Giovanni Agosta, Alessandro Barenghi, Fabrizio D. Santis, Andrea D. Biagio, Gerardo Pelosi

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 260, Package, Security

November 26, 2010 by hgpu

Synergistic execution of stream programs on multicores with accelerators

Abhishek Udupa, R. Govindarajan, Matthew J. Thazhuthaveetil

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Tags: Computer science, CUDA, High-level Languages, nVidia, nVidia GeForce 8800 GTS, Package

November 23, 2010 by hgpu

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

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Tags: Biology, Computer science, CUDA, Error recovery, nVidia, Package

November 22, 2010 by hgpu

Parallel Position Weight Matrices Algorithms

Mathieu Giraud, Jean-Stephane Varre

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Tags: Biology, Computer science, CUDA, nVidia, nVidia GeForce 8800, nVidia GeForce GTX 280, Package

November 22, 2010 by hgpu

GPGPU computation and visualization of three-dimensional cellular automata

Stephane Gobron, Arzu Coltekin, Herve Bonafos and Daniel Thalmann

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Tags: Cellular automata, Computer science, Medicine, nVidia, nVidia GeForce 8800 GTX, OpenGL, Package, Visualization

November 20, 2010 by hgpu

Accelerating numerical solution of stochastic differential equations with CUDA

M. Januszewski, M. Kostur

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Tags: Computational Physics, CUDA, Diffusion equation, nVidia, Package, Physics, Tesla C1060

November 19, 2010 by hgpu

GPUODEBenchmarks: Comparsion of Julia's GPU Kernel based ODE solvers with other open-source GPU ODE solvers

Automating Heterogeneous Parallelism in Numerical Differential Equations

Dat3M: Memory Model Aware Verification

Towards Unified Analysis of GPU Consistency

NVIDIA Federated Learning Application Runtime Environment

Supercharging Federated Learning with Flower and NVIDIA FLARE

Chat AI: A Seamless Slurm-Native Solution for HPC-Based Services

PSCToolkit: solving sparse linear systems with a large number of GPUs

CATBench: Benchmarking Framework

CATBench: A Compiler Autotuning Benchmarking Suite for Black-box Optimization

General-purpose Polyhedral Compilers

A Survey of General-purpose Polyhedral Compilers

Optimal Kernel Orchestration for Tensor Programs with Korch

Astaroth: A Scalable Multi-GPU Library for Stencil Computations

Stencil Computations on AMD and Nvidia Graphics Processors: Performance and Tuning Strategies

Bag of Tricks: Benchmarking of Jailbreak Attacks on LLMs. Empirical tricks for LLM Jailbreaking

Bag of Tricks: Benchmarking of Jailbreak Attacks on LLMs

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high performance computing on graphics processing units: hgpu.org

Packages

GPU-BLAST: Using graphics processors to accelerate protein sequence alignment

Shader algebra

A flexible simulation framework for graphics architectures

StarPU: A Unified Platform for Task Scheduling on Heterogeneous Multicore Architectures

Highly accelerated feature detection in proteomics data sets using modern graphics processing units

Fast Disk Encryption through GPGPU Acceleration

Synergistic execution of stream programs on multicores with accelerators

A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware

Parallel Position Weight Matrices Algorithms

GPGPU computation and visualization of three-dimensional cellular automata

Accelerating numerical solution of stochastic differential equations with CUDA

Recent source codes

GPUODEBenchmarks: Comparsion of Julia's GPU Kernel based ODE solvers with other open-source GPU ODE solvers

Dat3M: Memory Model Aware Verification

NVIDIA Federated Learning Application Runtime Environment

Chat AI: A Seamless Slurm-Native Solution for HPC-Based Services

PSCToolkit: solving sparse linear systems with a large number of GPUs

CATBench: Benchmarking Framework

General-purpose Polyhedral Compilers

Optimal Kernel Orchestration for Tensor Programs with Korch

Astaroth: A Scalable Multi-GPU Library for Stencil Computations

Bag of Tricks: Benchmarking of Jailbreak Attacks on LLMs. Empirical tricks for LLM Jailbreaking

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