high performance computing on graphics processing units: hgpu.org

Programming

hgpu.org » Programming

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

Dinghua Li, Chi-Man Liu, Ruibang Luo, Kunihiko Sadakane, Tak-Wah Lam

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Tags: Biology, CUDA, Genomics, nVidia, Package, Tesla K40

September 29, 2014 by hgpu

A GPU-based Algorithm-specific Optimization for High-performance Background Subtraction

Chulian Zhang, Hamed Tabkhi, Gunar Schirner

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Tags: Algorithms, CUDA, Image processing, nVidia, Tesla C2075

September 29, 2014 by hgpu

Enabling Efficient Use of MPI and PGAS Programming Models on Heterogeneous Clusters with High Performance Interconnects

Sreeram Potluri

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Tags: Computer science, CUDA, Heterogeneous systems, Intel Xeon Phi, MPI, nVidia, OpenCL, Tesla, Tesla C2075, Tesla K20, Tesla M2090

September 29, 2014 by hgpu

Decoupling algorithms from the organization of computation for high performance image processing

Fredo Durand, Saman Amarashinghe

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Tags: Algorithms, CUDA, Image processing, nVidia, Sensing, Tesla C2070, Thesis

September 29, 2014 by hgpu

XBOOLE-CUDA: Fast Boolean Operations on the GPU

Bernd Steinbach, Matthias Werner

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 690, Tesla C2070

September 29, 2014 by hgpu

An hybrid AES-256-GCM implementation for NEON CPU & CUDA GPU

Romain Dolbeau

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Tags: AES, Computer science, CUDA, nVidia, nVidia GeForce GT 620, Package, Security

September 28, 2014 by hgpu

A Study of the Potential of Locality-Aware Thread Scheduling for GPUs

Cedric Nugteren, Gert-Jan van den Braak, Henk Corporaal

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Tags: Computer science, CUDA, Matrix multiplication, nVidia, nVidia GeForce GTX 580, OpenCL, Task scheduling

September 28, 2014 by hgpu

High-performance Implementations and Large-scale Validation of the Link-wise Artificial Compressibility Method

Christian Obrecht, Pietro Asinari, Frederic Kuznik, Jean-Jacques Roux

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Tags: CUDA, Fluid dynamics, Lattice Boltzmann model, nVidia, nVidia GeForce GTX Titan, Spectral elements

September 28, 2014 by hgpu

NAS Parallel Benchmarks for GPGPUs using a Directive-based Programming Model

Rengan Xu, Xiaonan Tian, Sunita Chandrasekaran, Yonghong Yan, Barbara Chapman

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Tags: Benchmarking, Computer science, CUDA, MPI, nVidia, OpenACC, Tesla K20

September 28, 2014 by hgpu

Accelerating Phylogenetic Inference on GPUs: an OpenACC and CUDA comparison

Lidia Kuan, Joao Neves, Frederico Pratas, Pedro Tomas, Leonel Sousa

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 580, OpenACC, Performance, Tesla K20

September 28, 2014 by hgpu

An open source finite-difference time-domain solver for room acoustics using graphics processing units

Jukka Saarelma, Lauri Savioja

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Tags: Acoustics, Computer science, CUDA, FDTD, Finite-difference time-domain, nVidia, nVidia GeForce GTX 690, OpenGL, Package, Visualization

September 25, 2014 by hgpu

Study on semi-global matching algorithm extended for multi baseline matching and parallel processing method based on GPU

Zhaohua Liu, Yuxia Yang

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Tags: Algorithms, Computer science, CUDA, nVidia, Tesla C2050

September 25, 2014 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

A GPU-based Algorithm-specific Optimization for High-performance Background Subtraction

Enabling Efficient Use of MPI and PGAS Programming Models on Heterogeneous Clusters with High Performance Interconnects

Decoupling algorithms from the organization of computation for high performance image processing

XBOOLE-CUDA: Fast Boolean Operations on the GPU

An hybrid AES-256-GCM implementation for NEON CPU & CUDA GPU

A Study of the Potential of Locality-Aware Thread Scheduling for GPUs

High-performance Implementations and Large-scale Validation of the Link-wise Artificial Compressibility Method

NAS Parallel Benchmarks for GPGPUs using a Directive-based Programming Model

Accelerating Phylogenetic Inference on GPUs: an OpenACC and CUDA comparison

An open source finite-difference time-domain solver for room acoustics using graphics processing units

Study on semi-global matching algorithm extended for multi baseline matching and parallel processing method based on GPU

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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