high performance computing on graphics processing units: hgpu.org

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Accelerating Smith-Waterman on Heterogeneous CPU-GPU Systems

Jaideep Singh, Ipseeta Aruni

Tags: Bioinformatics, Biology, CUDA, Heterogeneous systems, nVidia, Smith-Waterman algorithm

June 24, 2011 by hgpu

Optimization of a GPU Implementation of Multi-Dimensional RF Pulse Design Algorithm

Wei Cai, Xiangrong Zhou, Xuelin Cui

Tags: Image reconstruction, Medicine, MRI, nVidia, Optimization, Tesla C1060

June 24, 2011 by hgpu

Implementation of a Soft Morphological Filter Based on GPU Framework

Lipeng Wang, Hanbin Wang

Tags: Computer science, CUDA, Filtering, nVidia

June 24, 2011 by hgpu

An algorithm for efficient computation of spatial impulse response on the GPU with application in ultrasound simulation

Ramtin Shams, Florian Luna, Richard I. Hartley

Tags: Algorithms, CUDA, Medicine, nVidia, Ultrasound

June 24, 2011 by hgpu

Design and implementation of a time-division multiplexing scan architecture using serializer and deserializer in GPU chips

Amit Sanghani, Bo Yang, Karthikeyan Natarajan, Chunsheng Liu

Tags: Computer science, Electronic design automation, Hardware Architecture, nVidia

June 24, 2011 by hgpu

GPU-Based Parallel Signature Scanning and Hash Generation

Bernhard Fechner

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Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce GTX 260, Pattern Search, Security, Sequence matching

June 24, 2011 by hgpu

Efficiently GPU-accelerating long kernel convolutions in 3-D DIRECT TOF PET reconstruction via a kernel decomposition scheme

Sungsoo Ha, Zhiyuan Zhang, Klaus Mueller, Samuel Matej

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Tags: Image reconstruction, Medicine, nVidia, PET, Tesla C870

June 23, 2011 by hgpu

Real-time arbitrary view rendering on GPU from stereo video and time-of-flight camera

Tugrul K. Ates, A. Aydin Alatan

Tags: Computer science, Computer vision, Rendering

June 23, 2011 by hgpu

Rapid star map simulation based on GPU

Shi Qun-shan, Lan Chao-zhen, Xu Qing, Zhou Yang, Liu Zhi-qing

Tags: Algorithms, Image processing, OpenGL

June 23, 2011 by hgpu

Fast implementation of fully iterative scatter corrected OSEM for HRRT using GPU

Kyung Sang Kim, Jong Chul Ye

Tags: CUDA, Image reconstruction, Medicine, nVidia, PET, Tesla C1060

June 23, 2011 by hgpu

LOD Terrain Rendering by Local Parallel Processing on GPU

Alexandre Valdetaro, Gustavo Nunes, Alberto Raposo, Bruno Feijo, Rodrigo de Toledo

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Tags: 3D Graphics and Realism, Computer science, DirectX, nVidia, nVidia GeForce GTX 480, Rendering, Visualization

June 23, 2011 by hgpu

Case study: Runtime reduction of a buffer insertion algorithm using GPU parallel programming

Won Ha Choi, Xun Liu

Tags: Algorithms, CAD, Computer science, Electronic design automation

June 23, 2011 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

Accelerating Smith-Waterman on Heterogeneous CPU-GPU Systems

Optimization of a GPU Implementation of Multi-Dimensional RF Pulse Design Algorithm

Implementation of a Soft Morphological Filter Based on GPU Framework

An algorithm for efficient computation of spatial impulse response on the GPU with application in ultrasound simulation

Design and implementation of a time-division multiplexing scan architecture using serializer and deserializer in GPU chips

GPU-Based Parallel Signature Scanning and Hash Generation

Efficiently GPU-accelerating long kernel convolutions in 3-D DIRECT TOF PET reconstruction via a kernel decomposition scheme

Real-time arbitrary view rendering on GPU from stereo video and time-of-flight camera

Rapid star map simulation based on GPU

Fast implementation of fully iterative scatter corrected OSEM for HRRT using GPU

LOD Terrain Rendering by Local Parallel Processing on GPU

Case study: Runtime reduction of a buffer insertion algorithm using GPU parallel programming

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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