high performance computing on graphics processing units: hgpu.org

Applications

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Parallel GPGPU Evaluation of Small Angle X-ray Scattering Profiles in a Markov Chain Monte Carlo Framework

Lubomir D. Antonov, Christian Andreetta, Thomas Hamelryck

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Tags: Algorithms, Biology, Medicine, nVidia, nVidia GeForce GTX 560 Ti, OpenCL, Package

January 30, 2013 by hgpu

Faster Algorithms for RNA-folding using the Four-Russians method

Balaji Venkatachalam, Yelena Frid, Dan Gusfield

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 550 Ti, RNA, Tesla C2070

January 30, 2013 by hgpu

Many-threaded Differential Evolution on the GPU

Pavel Kromer, Jan Platos, Vaclav Snasel, Ajith Abraham

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Tags: Algorithms, Computer science, CUDA, Differential evolution, Metaheuristics, nVidia, Tesla C2050

January 30, 2013 by hgpu

Scheduling (ir)regular applications on heterogeneous platforms

Artur Miguel Matos Mariano

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Tags: Computer science, CUDA, FFT, Heterogeneous systems, N-body simulation, nVidia, nVidia GeForce GTX 580, Task scheduling, Thesis

January 30, 2013 by hgpu

GPUDet: A Deterministic GPU Architecture

Hadi Jooybar, Wilson W. L. Fung, Mike O'Connor, Joseph Devietti, Tor M. Aamodt

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Tags: Computer science, GPGPU-sim, Hardware Architecture, nVidia, nVidia GeForce GTX 480

January 29, 2013 by hgpu

Efficient Implementation of MrBayes on multi-GPU

Jie Bao, Hongju Xia, Jianfu Zhou, Xiaoguang Liu, Gang Wang

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Tags: Bayesian, Biology, CUDA, GPU cluster, nVidia, nVidia GeForce GTX 480, Package, Task scheduling

January 28, 2013 by hgpu

A dataflow-like programming model for future hybrid clusters

Jens Breitbart

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Tags: Cluster computing, Computer science, CUDA, Distributed data structures, Hybrid computing, nVidia, nVidia GeForce GTX 480, Tesla C2050

January 28, 2013 by hgpu

Exploring Different Automata Representations for Efficient Regular Expression Matching on GPUs

Xiaodong Yu, Michela Becchi

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Tags: Cellular automata, Computer science, CUDA, nVidia, Performance, Security

January 28, 2013 by hgpu

Warped Register File: A Power Efficient Register File for GPGPUs

Mohammad Abdel-Majeed, Murali Annavaram

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Tags: Computer science, CUDA, GPGPU-sim, Hardware Architecture, nVidia, Performance

January 28, 2013 by hgpu

Reaction-diffusion model Monte Carlo simulations on the GPU

Raoul D. Schram

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Tags: Computational Physics, Monte Carlo simulation, nVidia, nVidia GeForce GTX 580, OpenCL, Physics, Statistical Mechanics

January 28, 2013 by hgpu

GPUfs: Integrating a File System with GPUs

Mark Silberstein, Bryan Ford, Idit Keidar, Emmett Witchel

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Tags: Computer science, CUDA, nVidia, Operating systems, Tesla C2075

January 26, 2013 by hgpu

Advanced Trends of Heterogeneous Computing with CPU-GPU Integration: Comparative Study

Ishan Rajani, G Nanda Gopal

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Tags: AMD FireStream 9270, ATI, Computer science, CUDA, Distributed computing, Heterogeneous systems, nVidia, OpenCL, Tesla C2050, Warp level parallelism

January 26, 2013 by hgpu

Allo: Accelerator Design Language

Dato: A Task-Based Programming Model for Dataflow Accelerators

Towards Robust Agentic CUDA Kernel Benchmarking, Verification, and Optimization

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Accelerating a Linear Programming Algorithm on AMD GPUs

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

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high performance computing on graphics processing units: hgpu.org

Applications

Parallel GPGPU Evaluation of Small Angle X-ray Scattering Profiles in a Markov Chain Monte Carlo Framework

Faster Algorithms for RNA-folding using the Four-Russians method

Many-threaded Differential Evolution on the GPU

Scheduling (ir)regular applications on heterogeneous platforms

GPUDet: A Deterministic GPU Architecture

Efficient Implementation of MrBayes on multi-GPU

A dataflow-like programming model for future hybrid clusters

Exploring Different Automata Representations for Efficient Regular Expression Matching on GPUs

Warped Register File: A Power Efficient Register File for GPGPUs

Reaction-diffusion model Monte Carlo simulations on the GPU

GPUfs: Integrating a File System with GPUs

Advanced Trends of Heterogeneous Computing with CPU-GPU Integration: Comparative Study

Recent source codes

Allo: Accelerator Design Language

Towards Robust Agentic CUDA Kernel Benchmarking, Verification, and Optimization

HPC Benchmark Survey

HDM: Home made Diffusion Models

General Matrix Multiplication (GEMM)

CrossTL: Universal Programming Language & Translator

TBD-GPU

DG-SWEM - The Discontinuous Galerkin Shallow Water Equation Model

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

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