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Accelerating Genomics Research with OpenCL and FPGAs

Chris Rauer, George S. Powley, Mir Ahsan, Nicholas Finamore

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Tags: Algorithms, Biology, Computer science, FPGA, Genomics, OpenCL

October 15, 2017 by hgpu

Flexible FPGA design for FDTD using OpenCL

Tobias Kenter, Jens Forstner, Christian Plessl

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Tags: Computer science, FDTD, Finite-difference time-domain, FPGA, OpenCL

October 15, 2017 by hgpu

Toward Performance Portability for CPUs and GPUs Through Algorithmic Compositions

Li-Wen Chang

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Tags: Algorithms, Computer science, Heterogeneous systems, nVidia, OpenCL, performance portability, Tesla C2050, Tesla K20, Thesis

October 15, 2017 by hgpu

Synkhronos: a Multi-GPU Theano Extension for Data Parallelism

Adam Stooke, Pieter Abbeel

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Tags: Computer science, CUDA, Data parallelism, Deep learning, nVidia, nVidia DGX-1, Package, Tesla P100, Theano

October 15, 2017 by hgpu

SoAx: A generic C++ Structure of Arrays for handling Particles in HPC Codes

Holger Homann, Francois Laenen

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Tags: Benchmarking, Computational Physics, Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GT 755 M, Package, Performance, Physics, Tesla M2050

October 15, 2017 by hgpu

Energy efficiency of finite difference algorithms on multicore CPUs, GPUs, and Intel Xeon Phi processors

Satya P. Jammy, Christian T. Jacobs, David J. Lusher, Neil D. Sandham

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Tags: Algorithms, Computer science, CUDA, Energy-efficient computing, Finite difference, Intel Xeon Phi, nVidia, Tesla K40

October 3, 2017 by hgpu

FPGA implementation of a Convolutional Neural Network for "Wake up word" detection

Ole Martin Skafsa

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Tags: CNN, Computer science, Deep learning, FPGA, Machine learning, Neural networks, NLP, nVidia, nVidia Tegra TX1, OpenCL, Thesis

October 3, 2017 by hgpu

Computing Treewidth on the GPU

Tom C. van der Zanden, Hans L. Bodlaender

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Tags: Algorithms, Bloom filter, Computer science, Graph theory, nVidia, nVidia GeForce GTX 1060, OpenCL, Package

October 3, 2017 by hgpu

An Efficient Load Balancing Method for Tree Algorithms

Osama Talaat Ibrahim, Ahmed El-Mahdy

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Tags: Algorithms, Computer science, Intel Xeon Phi, load balancing, Performance

October 3, 2017 by hgpu

Performance Evaluation of Container-based Virtualization for High Performance Computing Environments

Carlos Arango, Remy Dernat, John Sanabria

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Tags: Benchmarking, Computer science, CUDA, MPI, nVidia, Operating systems, Package, Performance, Tesla K20, Virtualization

October 3, 2017 by hgpu

OpenCL Actors – Adding Data Parallelism to Actor-based Programming with CAF

Raphael Hiesgen, Dominik Charousset, Thomas C. Schmidt

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Tags: Computer science, Data parallelism, Heterogeneous systems, Intel Xeon Phi, nVidia, nVidia GeForce GTX 780 M, OpenCL, Package, Tesla C2075

September 28, 2017 by hgpu

Modeling the Resource Requirements of Convolutional Neural Networks on Mobile Devices

Zongqing Lu, Swati Rallapalli, Kevin Chan, Thomas La Porta

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Tags: Computer science, Computer vision, CUDA, Deep learning, Neural networks, nVidia, nVidia Jetson TK1, nVidia Tegra TX1

September 28, 2017 by hgpu

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

BoltzGen:Toward Universal Binder Design

CUDA-L2: Surpassing cuBLAS Performance for Matrix Multiplication through Reinforcement Learning

cuPilot: A Strategy-Coordinated Multi-agent Framework for CUDA Kernel Evolution

MATLAB Tensor Core models

Accurate Models of NVIDIA Tensor Cores

TritonForge: Transform PyTorch Operations into Optimized GPU Kernels with LLMs

TritonForge: Profiling-Guided Framework for Automated Triton Kernel Optimization

RLTune: Hybrid Learning and Optimization-Based Dynamic Scheduling for DL Workloads on Heterogeneous GPU Clusters

Hybrid Learning and Optimization-Based Dynamic Scheduling for DL Workloads on Heterogeneous GPU Clusters

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high performance computing on graphics processing units: hgpu.org

Accelerating Genomics Research with OpenCL and FPGAs

Flexible FPGA design for FDTD using OpenCL

Toward Performance Portability for CPUs and GPUs Through Algorithmic Compositions

Synkhronos: a Multi-GPU Theano Extension for Data Parallelism

SoAx: A generic C++ Structure of Arrays for handling Particles in HPC Codes

Energy efficiency of finite difference algorithms on multicore CPUs, GPUs, and Intel Xeon Phi processors

FPGA implementation of a Convolutional Neural Network for "Wake up word" detection

Computing Treewidth on the GPU

An Efficient Load Balancing Method for Tree Algorithms

Performance Evaluation of Container-based Virtualization for High Performance Computing Environments

OpenCL Actors – Adding Data Parallelism to Actor-based Programming with CAF

Modeling the Resource Requirements of Convolutional Neural Networks on Mobile Devices

Recent source codes

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

BoltzGen:Toward Universal Binder Design

CUDA-L2: Surpassing cuBLAS Performance for Matrix Multiplication through Reinforcement Learning

cuPilot: A Strategy-Coordinated Multi-agent Framework for CUDA Kernel Evolution

MATLAB Tensor Core models

TritonForge: Transform PyTorch Operations into Optimized GPU Kernels with LLMs

RLTune: Hybrid Learning and Optimization-Based Dynamic Scheduling for DL Workloads on Heterogeneous GPU Clusters

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