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High performance bioinformatics and computational biology on general-purpose graphics processing units

Cheng Ling

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Tags: Bioinformatics, Biology, Computational biology, CUDA, FPGA, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 460, Sequence alignment, Thesis

January 3, 2013 by hgpu

Floating Point Arithmetic for Transport Triggered Architectures

Timo Tapani Viitanen

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Tags: Algorithms, Benchmarking, Computer science, FPGA, OpenCL, Thesis

December 30, 2012 by hgpu

From Parallel Programs to Customized Parallel Processors

Pekka Jaaskelainen

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Tags: Algorithms, Compilers, Computer science, FPGA, High-level Languages, nVidia, nVidia GeForce 9400, OpenCL, Thesis

November 27, 2012 by hgpu

Multidimensional Costas Arrays and Their Enumeration Using GPUs and FPGAs

Rafael A. Arce-Nazario, Jose Ortiz-Ubarri

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Tags: Computer science, CUDA, FPGA, nVidia, nVidia GeForce GTX 580

November 24, 2012 by hgpu

Reusable OpenCL FPGA Infrastructure

Stephen Alexander Chin

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Tags: Computer science, FPGA, Heterogeneous systems, OpenCL, Thesis

November 8, 2012 by hgpu

Kernel Specialization for Improved Adaptability and Performance on Graphics Processing Units (GPUs)

Nicholas John Moore

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Tags: Computer science, CUDA, FPGA, Image reconstruction, nVidia, Optimization, Tesis, Tesla C1060, Tesla C2070

October 26, 2012 by hgpu

Automatic Generation Of Application-Specific Accelerators for FPGAs from Python Loop Nests

David Sheffield, Michael Anderson, Kurt Keutzer

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Source codes

Tags: Computer science, Design space exploration, FPGA, Package, Python

October 25, 2012 by hgpu

Modular & Scalable Ultrasound Platform with GPU Processing

M. Lewandowski, M. Walczak, B. Witek, P. Kulesza, K. Sielewicz

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Tags: CUDA, FPGA, nVidia, nVidia GeForce GTX 580, Signal processing, Ultrasound

October 25, 2012 by hgpu

Floating-Point Arithmetic in Transport Triggered Architectures

Timo Viitanen

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Tags: Computer science, FPGA, OpenCL, Thesis

October 24, 2012 by hgpu

Stereo Matching using Multi-Resolution Images on CUDA

Sudhakar Sah, Nikhil Jotwani

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Tags: CUDA, FPGA, Image processing, nVidia, nVidia GeForce GTX 480

October 22, 2012 by hgpu

FPGA-GPU-CPU Heterogenous Architecture for Real-time Cardiac Physiological Optical Mapping

Pingfan Meng, Matthew Jacobsen, Ryan Kastner

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Tags: Algorithms, CUDA, FPGA, Image processing, Medicine, nVidia, nVidia GeForce GTX 590

October 13, 2012 by hgpu

Enabling Development of OpenCL Applications on FPGA platforms

Kavya Subraya Shagrithaya

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Tags: Computer science, FPGA, OpenCL, Thesis

September 26, 2012 by hgpu

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

Shamrock: Multi-GPU hydrodynamics for astrophysics

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

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high performance computing on graphics processing units: hgpu.org

High performance bioinformatics and computational biology on general-purpose graphics processing units

Floating Point Arithmetic for Transport Triggered Architectures

From Parallel Programs to Customized Parallel Processors

Multidimensional Costas Arrays and Their Enumeration Using GPUs and FPGAs

Reusable OpenCL FPGA Infrastructure

Kernel Specialization for Improved Adaptability and Performance on Graphics Processing Units (GPUs)

Automatic Generation Of Application-Specific Accelerators for FPGAs from Python Loop Nests

Modular & Scalable Ultrasound Platform with GPU Processing

Floating-Point Arithmetic in Transport Triggered Architectures

Stereo Matching using Multi-Resolution Images on CUDA

FPGA-GPU-CPU Heterogenous Architecture for Real-time Cardiac Physiological Optical Mapping

Enabling Development of OpenCL Applications on FPGA platforms

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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