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AnySeq/GPU: A Novel Approach for Faster Sequence Alignment on GPUs

André Müller, Bertil Schmidt, Richard Membarth, Roland Leißa, Sebastian Hack

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Tags: AMD Radeon Instinct MI100, ATI, Bioinformatics, Biology, CUDA, Next-Generation sequencing, nVidia, nVidia GeForce RTX 3090, OpenCL, Package, Sequence alignment, Tesla A100

May 22, 2022 by hgpu

Performance Comparison of Different OpenCL Implementations of LBM Simulation on Commodity Computer Hardware

Jelena Tekic, Predrag Tekic, Milos Rackovic

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Tags: AMD Radeon R5 M420, AMD Radeon R5 M430, ATI, cfd, Fluid dynamics, Heterogeneous systems, Lattice Boltzmann model, nVidia, nVidia GeForce GTX 940, nVidia GeForce GTX 960, OpenCL, Performance, Tesla C2070

April 17, 2022 by hgpu

Optimizing Performance and Energy Efficiency in Massively Parallel Systems

Raúl Nozal González

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Tags: AMD Radeon RX 5700 XT, ATI, Computer science, Heterogeneous systems, HPC, nVidia, nVidia GeForce GTX 950, nVidia GeForce GTX Titan X, OpenCL, Package, Performance, SYCL, Tesla K20, Thesis

April 10, 2022 by hgpu

Benchmarking a Proof-of-Concept Performance Portable SYCL-based Fast Fourier Transformation Library

Vincent R. Pascuzzi, Mehdi Goli

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Tags: AMD Radeon Instinct MI100, ATI, Benchmarking, Computer science, FFT, Heterogeneous systems, HIP, HPC, nVidia, nVidia A100, OpenCL, performance portability, SYCL

March 20, 2022 by hgpu

HipBone: A performance-portable GPU-accelerated C++ version of the NekBone benchmark

Noel Chalmers, Abhishek Mishra, Damon McDougall, Tim Warburton

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Tags: AMD Radeon Instinct MI100, AMD Radeon Instinct MI250X, ATI, Benchmarking, Computer science, CUDA, HIP, HPC, MPI, nVidia, Package, Performance, Tesla V100

March 11, 2022 by hgpu

On the accuracy and performance of the lattice Boltzmann method with 64-bit, 32-bit and novel 16-bit number formats

Moritz Lehmann, Mathias J. Krause, Giorgio Amati, Marcello Sega, Jens Harting, Stephan Gekle

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Tags: AMD Radeon Instinct MI100, AMD Radeon VI, ATI, Fluid dynamics, lattice Boltzmann, Mixed precision, nVidia, OpenCL, Tesla K20, Tesla K40, Tesla K80, Tesla P100, Tesla V100

December 19, 2021 by hgpu

High performance computing on Android devices – a case study

Robert Fritze, Claudia Plant

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Tags: AMD Radeon VII, Android, ATI, Benchmarking, Computer science, HPC, nVidia GeForce Titan V, OpenCL

December 12, 2021 by hgpu

Generating GPU Compiler Heuristics using Reinforcement Learning

Ian Colbert, Jake Daly, Norm Rubin

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Tags: AMD Radeon 6800 XT, AMD Radeon RX 5700 XT, ATI, Compilers, Computer science, Machine learning, Performance

November 28, 2021 by hgpu

Homomorphic-Encrypted Volume Rendering

Sebastian Mazza

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Tags: Algorithms, AMD Radeon RX 580, ATI, Computer science, GLSL, nVidia, nVidia GeForce RTX 3090, Package, Rendering, Security, Thesis, Visualization, Vulkan

October 17, 2021 by hgpu

Embedded Software Synthesis using Heterogeneous Dataflow Models

Omair Rafique

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Tags: ATI, ATI Radeon HD 5450, Code generation, Computer science, Heterogeneous systems, nVidia, nVidia GeForce GTX 1050, nVidia GeForce GTX 950 M, OpenCL, Thesis

October 3, 2021 by hgpu

Achieving near native runtime performance and cross-platform performance portability for random number generation through SYCL interoperability

Vincent R. Pascuzzi, Mehdi Goli

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Tags: AMD Radeon RX Vega 56, ATI, Computer science, Heterogeneous systems, nVidia, nVidia A100, performance portability, Pseudo-random number generators, SYCL

September 19, 2021 by hgpu

Measurement and Analysis of GPU-accelerated Applications with HPCToolkit

Keren Zhou, Laksono Adhianto, Jonathon Anderson, Aaron Cherian, Dejan Grubisic, Mark Krentel, Yumeng Liu, Xiaozhu Meng, John Mellor-Crummey

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Tags: AMD Radeon Instinct Mi50, ATI, Code generation, Computer science, HPC, nVidia, OpenCL, Performance, Tesla V100

September 19, 2021 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

AnySeq/GPU: A Novel Approach for Faster Sequence Alignment on GPUs

Performance Comparison of Different OpenCL Implementations of LBM Simulation on Commodity Computer Hardware

Optimizing Performance and Energy Efficiency in Massively Parallel Systems

Benchmarking a Proof-of-Concept Performance Portable SYCL-based Fast Fourier Transformation Library

HipBone: A performance-portable GPU-accelerated C++ version of the NekBone benchmark

On the accuracy and performance of the lattice Boltzmann method with 64-bit, 32-bit and novel 16-bit number formats

High performance computing on Android devices – a case study

Generating GPU Compiler Heuristics using Reinforcement Learning

Homomorphic-Encrypted Volume Rendering

Embedded Software Synthesis using Heterogeneous Dataflow Models

Achieving near native runtime performance and cross-platform performance portability for random number generation through SYCL interoperability

Measurement and Analysis of GPU-accelerated Applications with HPCToolkit

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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