high performance computing on graphics processing units: hgpu.org

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OpenCL-accelerated object classification in video streams using Spatial Pooler of Hierarchical Temporal Memory

Maciej Wielgosz, Marcin Pietron

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Tags: Algorithms, AMD Radeon R9 390, ATI, Computer science, Computer vision, Machine learning, OpenCL, Package, PyOpenCL, Python

August 8, 2016 by hgpu

Iterative Hard Thresholding for Model Selection in Genome-Wide Association Studies

Kevin L. Keys, Gary K. Chen, Kenneth Lange

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Tags: Bioinformatics, Genetics, Machine learning, nVidia, OpenCL, Package, Statistics, Tesla C2050

August 8, 2016 by hgpu

RETURNN: The RWTH Extensible Training framework for Universal Recurrent Neural Networks

Patrick Doetsch, Albert Zeyer, Paul Voigtlaender, Ilya Kulikov, Ralf Schluter, Hermann Ney

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Tags: Computer science, CUDA, Machine learning, Neural and Evolutionary Computing, nVidia, nVidia GeForce GTX 980, Package, RNN, Speech recognition

August 4, 2016 by hgpu

Drug Drug Interaction Extraction from Biomedical Literature Using Syntax Convolutional Neural Network

Zhehuan Zhao, Zhihao Yang, Ling Luo, Hongfei Lin, Jian Wang

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Tags: Bioinformatics, Biology, CUDA, Deep learning, Neural networks, NLP, nVidia, Package, Python, Tesla K20, Text mining

August 1, 2016 by hgpu

3D visualization of astronomy data cubes using immersive displays

Gilles Ferrand, Jayanne English, Pourang Irani

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Tags: Astrophysics, Instrumentation and Methods for Astrophysics, nVidia, OpenGL, Package, Rendering, Virtual reality, Visualization

August 1, 2016 by hgpu

An Autotuning Framework for Intel Xeon Phi Platforms

Lefteris Christoforidis

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Tags: Computer science, Intel Xeon Phi, Package, Performance, Python, Thesis

July 30, 2016 by hgpu

Real-Time Stochastic Kinodynamic Motion Planning via Multiobjective Search on GPUs

Brian Ichter, Edward Schmerling, Ali-akbar Agha-mohammadi, Marco Pavone

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 980, Package, Robotics

July 28, 2016 by hgpu

Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support

Marius Erbert, Steffen Rechner, Matthias Muller-Hannemann

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, nVidia GeForce GTX 970, nVidia GeForce GTX Titan, Package

July 26, 2016 by hgpu

Scientific Computing Using Consumer Video-Gaming Hardware Devices

Glenn Volkema, Gaurav Khanna

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Tags: AMD Radeon R9 Fury X, ATI, Benchmarking, Computer science, nVidia, nVidia Tegra TX1, OpenCL, Package, Performance, Tesla K40

July 20, 2016 by hgpu

IODA: an Input/Output Deep Architecture for image labeling

J. Lerouge, R. Herault, Clement Chatelain, F. Jardin, R. Modzelewski

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Tags: Computer science, CUDA, Deep learning, Neural networks, nVidia, Package, Python, Tesla C1060, Theano

July 18, 2016 by hgpu

GeauxDock: Accelerating Structure-Based Virtual Screening with Heterogeneous Computing

Ye Fang, Yun Ding, Wei P. Feinstein, David M. Koppelman, Juana Moreno, Mark Jarrell, J. Ramanujam, Michal Brylinski

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Tags: Algorithms, Chemistry, CUDA, Heterogeneous systems, Intel Xeon Phi, Medicine, Molecular dynamics, nVidia, nVidia GeForce GTX 980, OpenMP, Package

July 16, 2016 by hgpu

OpenFace: A general-purpose face recognition library with mobile applications

Brandon Amos, Bartosz Ludwiczuk, Mahadev Satyanarayanan

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Tags: Computer science, Computer vision, CUDA, Deep learning, Lua, Neural networks, nVidia, Package, Python, Tesla K40

July 13, 2016 by hgpu

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Accelerating a Linear Programming Algorithm on AMD GPUs

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Towards Efficient and Practical GPU Multitasking in the Era of LLM

Bandicoot: C++ library for GPU accelerated linear algebra

Bandicoot: A Templated C++ Library for GPU Linear Algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

The Fused Kernel Library: A C++ API to Develop Highly-Efficient GPU Libraries

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

Block: Balance Loader of LLM Serving with Context, Knowledge and Predictive Scheduling

Block: Balancing Load in LLM Serving with Context, Knowledge and Predictive Scheduling

SIGMo: Scalable Isomorphism Graph Matching on GPUs

SIGMo: High-Throughput Batched Subgraph Isomorphism on GPUs for Molecular Matching

DGEMM without FP64 Arithmetic - using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

DGEMM without FP64 Arithmetic – using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

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high performance computing on graphics processing units: hgpu.org

Packages

OpenCL-accelerated object classification in video streams using Spatial Pooler of Hierarchical Temporal Memory

Iterative Hard Thresholding for Model Selection in Genome-Wide Association Studies

RETURNN: The RWTH Extensible Training framework for Universal Recurrent Neural Networks

Drug Drug Interaction Extraction from Biomedical Literature Using Syntax Convolutional Neural Network

3D visualization of astronomy data cubes using immersive displays

An Autotuning Framework for Intel Xeon Phi Platforms

Real-Time Stochastic Kinodynamic Motion Planning via Multiobjective Search on GPUs

Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support

Scientific Computing Using Consumer Video-Gaming Hardware Devices

IODA: an Input/Output Deep Architecture for image labeling

GeauxDock: Accelerating Structure-Based Virtual Screening with Heterogeneous Computing

OpenFace: A general-purpose face recognition library with mobile applications

Recent source codes

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Bandicoot: C++ library for GPU accelerated linear algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

Block: Balance Loader of LLM Serving with Context, Knowledge and Predictive Scheduling

SIGMo: Scalable Isomorphism Graph Matching on GPUs

DGEMM without FP64 Arithmetic - using FP64 Emulation and FP8 Tensor Cores with Ozaki Scheme

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