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Assessing Opportunities of SYCL and Intel oneAPI for Biological Sequence Alignment

Manuel Costanzo, Enzo Rucci, Carlos García Sánchez, Marcelo Naiouf, Manuel Prieto-Matías

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Tags: Bioinformatics, Biology, Computational biology, Computer science, CUDA, Heterogeneous systems, Intel, Intel UHD 630, nVidia, nVidia GeForce GTX 1080, nVidia GeForce GTX 980, nVidia GeForce RTX 2070, nVidia GeForce RTX 3090, OpenCL, Sequence alignment, SYCL, Tesla V100

November 27, 2022 by hgpu

Challenges and Techniques for Transparent Acceleration of Unmodified Big Data Applications

Maria Nektaria Xekalaki

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Tags: Benchmarking, Computer science, CUDA, FPGA, Heterogeneous systems, Java, nVidia, nVidia GeForce GTX 1060, nVidia Quadro GP100, OpenCL, Package, Performance, Tesla V100, Thesis

November 20, 2022 by hgpu

Apple Silicon Performance in Scientific Computing

Connor Kenyon, Collin Capano

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Tags: Benchmarking, Computer science, Heterogeneous systems, nVidia, nVidia A100, nVidia V100, OpenCL, Performance

November 6, 2022 by hgpu

Tausch: A halo exchange library for large heterogeneous computing systems using MPI, OpenCL, and CUDA

Lukas Spies, Amanda Bienz, David Moulton, Luke Olson, Andrew Reisner

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Tags: Computer science, CUDA, Heterogeneous systems, MPI, nVidia, OpenCL, Package, Tesla V100

October 23, 2022 by hgpu

Towards Performance Portable Programming for Distributed Heterogeneous Systems

Polykarpos Thomadakis, Nikos Chrisochoides

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, OpenCL, Package, Performance, performance portability, Tesla V100

October 9, 2022 by hgpu

Decompiling x86 Deep Neural Network Executables

Zhibo Liu, Yuanyuan Yuan, Shuai Wang, Xiaofei Xie, Lei Ma

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Tags: Computer science, CUDA, Deep learning, Heterogeneous systems, Neural networks, nVidia, nVidia GeForce RTX 2080, OpenCL, Package, Security

October 9, 2022 by hgpu

Exploiting dynamic sparse matrices for performance portable linear algebra operations

Chris Stylianou, Michele Weiland

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Tags: Computer science, CUDA, Heterogeneous systems, HPC, Linear Algebra, MPI, nVidia, OpenMP, Package, Sparse matrix, Tesla V100

October 2, 2022 by hgpu

EnergonAI: An Inference System for 10-100 Billion Parameter Transformer Models

Jiangsu Du, Ziming Liu, Jiarui Fang, Shenggui Li, Yongbin Li, Yutong Lu, Yang You

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Tags: Computer science, CUDA, Deep learning, Heterogeneous systems, NLP, nVidia, nVidia A100, Package

September 11, 2022 by hgpu

Towards Understanding and Mitigating Memory-Access Challenges in Computing Systems

Mohammad K. Dashti

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Tags: Computer science, CUDA, Deep learning, Heterogeneous systems, Memory model, nVidia, nVidia GeForce RTX 2070, nVidia Jetson TK1, OpenCL, Package, Thesis

August 28, 2022 by hgpu

Deep Learning Approaches to Source Code Analysis for Optimization of Heterogeneous Systems: Recent Results, Challenges and Opportunities

Francesco Barchi, Emanuele Parisi, Andrea Bartolini, Andrea Acquaviva

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Tags: AMD Radeon HD 7970, ATI, Computer science, Deep learning, Heterogeneous systems, nVidia, nVidia GeForce GTX 970, OpenCL, Optimization, Overview, Security

August 7, 2022 by hgpu

Design and Implementation of ShenWei Universal C/C++

Huanqi Cao, Jiajie Chen

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Tags: Compilers, Computer science, CUDA, Heterogeneous systems, nVidia, OpenCL

August 7, 2022 by hgpu

Demystifying Dependency Bugs in Deep Learning Stack

Kaifeng Huang, Bihuan Chen, Susheng Wu, Junmin Cao, Lei Ma, Xin Peng

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Tags: Computer science, CUDA, Deep learning, Heterogeneous systems, nVidia

July 24, 2022 by hgpu

Qwen3-235B @ 1M tokens on AMD MI355X

CHUNDER: Enabling Million-Token Qwen3 Serving on AMD ROCm

CUDA++ for the NVIDIA DGX Spark

Reverse Engineering the CUDA Software Stack: A Clean-Room GPU Machine-Code Toolchain for the NVIDIA GB10

ATTUNE: Agentic Throughput Tuning for LLM Training

HPCAgent-Bench: A Framework for Sound Benchmarking of Code-Optimizing Agents, Harnesses, and Skills

Brian2 Atlas

A Unified Intermediate Representation and Execution Architecture for Heterogeneous and Distributed Neural Simulation

AgentGarten: Code Worlds for Evolving Agents

KernelLens: Automated Triton-to-C++ Compiler for Enterprise Inference Runtimes

KernelLens: Deploying Triton Kernels to C++ Inference Engines

Introduction to Computer Vision

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

ACT: Accelerator Compiler Toolkit

Automatically Generating ML Compiler Backends from Tensor Accelerator ISA Descriptions

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high performance computing on graphics processing units: hgpu.org

Assessing Opportunities of SYCL and Intel oneAPI for Biological Sequence Alignment

Challenges and Techniques for Transparent Acceleration of Unmodified Big Data Applications

Apple Silicon Performance in Scientific Computing

Tausch: A halo exchange library for large heterogeneous computing systems using MPI, OpenCL, and CUDA

Towards Performance Portable Programming for Distributed Heterogeneous Systems

Decompiling x86 Deep Neural Network Executables

Exploiting dynamic sparse matrices for performance portable linear algebra operations

EnergonAI: An Inference System for 10-100 Billion Parameter Transformer Models

Towards Understanding and Mitigating Memory-Access Challenges in Computing Systems

Deep Learning Approaches to Source Code Analysis for Optimization of Heterogeneous Systems: Recent Results, Challenges and Opportunities

Design and Implementation of ShenWei Universal C/C++

Demystifying Dependency Bugs in Deep Learning Stack

Recent source codes

Qwen3-235B @ 1M tokens on AMD MI355X

CUDA++ for the NVIDIA DGX Spark

ATTUNE: Agentic Throughput Tuning for LLM Training

HPCAgent-Bench: A Framework for Sound Benchmarking of Code-Optimizing Agents, Harnesses, and Skills

Brian2 Atlas

AgentGarten: Code Worlds for Evolving Agents

KernelLens: Automated Triton-to-C++ Compiler for Enterprise Inference Runtimes

Introduction to Computer Vision

KernelZero: Co-Evolving Proposer and Coder for Continuously Improved GPU Kernel Generation

ACT: Accelerator Compiler Toolkit

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