high performance computing on graphics processing units: hgpu.org

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Parallel Wavelet Schemes for Images

David Barina, Michal Kula, Pavel Zemcik

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Tags: AMD Radeon R9 290X, AMD Radeon R9 Fury, ATI, Compression, Discrete Wavelet Transform, Image processing, nVidia, nVidia GeForce GTX 580, nVidia GeForce GTX Titan X, OpenCL, Package

May 7, 2016 by hgpu

TheanoLM – An Extensible Toolkit for Neural Network Language Modeling

Seppo Enarvi, Mikko Kurimo

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Tags: Computer science, CUDA, Deep learning, Machine learning, Neural networks, NLP, nVidia, Package, Python, RNN, Speech recognition, Theano

May 7, 2016 by hgpu

Parallel Pairwise Correlation Computation On Intel Xeon Phi Clusters

Yongchao Liu, Tony Pan, Srinivas Aluru

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Tags: Algorithms, Bioinformatics, Computer science, Intel Xeon Phi, OpenMP

May 7, 2016 by hgpu

TrimZero: A Torch Recurrent Module for Efficient Natural Language Processing

Jin-Hwa Kim, Jeonghee Kim, Jung-Woo Ha, Byoung-Tak Zhang

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Tags: Computer science, CUDA, Deep learning, Lua, Machine learning, Neural networks, NLP, nVidia, Package, RNN, Torch

May 3, 2016 by hgpu

Fast hyperbolic Radon transform represented as convolutions in log-polar coordinates

Viktor V. Nikitin, Fredrik Andersson, Marcus Carlsson, Anton A. Duchkov

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Tags: CUDA, FFT, Geoscience, Mathematics, Numerical Analysis, nVidia, Radon transform, Seismic modeling

May 3, 2016 by hgpu

Automatic Test Case Reduction for OpenCL

Moritz Pflanzer, Alastair F. Donaldson, Andrei Lascu

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Tags: Code generation, Compilers, Computer science, nVidia, nVidia GeForce GTX Titan, OpenCL

May 3, 2016 by hgpu

Polly-ACC: Transparent compilation to heterogeneous hardware

Tobias Grosser, Torsten Hoefler

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Tags: Code generation, Compilers, Computer science, CUDA, Heterogeneous systems, LLVM, nVidia, nVidia GeForce GT 730 M, nVidia GeForce GTX Titan Black

May 3, 2016 by hgpu

Exposing Errors Related to Weak Memory in GPU Applications

Tyler Sorensen, Alastair F. Donaldson

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Tags: Computer science, CUDA, Memory, nVidia, nVidia GeForce GTX 770, nVidia GeForce GTX 980, nVidia GeForce GTX Titan, nVidia Quadro K5200, Tesla C2050, Tesla C2075, Tesla K20

May 3, 2016 by hgpu

Array Program Transformation with Loo.py by Example: High-Order Finite Elements

Andreas Klockner, Lucas C. Wilcox, T. Warburton

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Tags: Algorithms, AMD Radeon R9 Fury, ATI, Code generation, Computer science, Fortran, Numerical Analysis, nVidia, nVidia GeForce GTX Titan X, OpenCL, Package, Performance, Prefetch, Programming Languages, Python, Tesla K40

April 29, 2016 by hgpu

On the design of sparse hybrid linear solvers for modern parallel architectures

Stojce Nakov

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Tags: Algorithms, Computer science, CUDA, Heterogeneous systems, Linear Algebra, MPI, nVidia, Sparse linear iterative solvers, Sparse matrix, Tesla K40, Tesla M2070, Thesis

April 29, 2016 by hgpu

Automatic Parallelization: Executing Sequential Programs on a Task-Based Parallel Runtime

Alcides Fonseca, Bruno Cabral, Joao Rafael, Ivo Correia

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Tags: Computer science, Java, OpenCL, Package, Programming Languages

April 29, 2016 by hgpu

Adaptive GPU Array Layout Auto-Tuning

Nicolas Weber, Michael Goesele

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Tags: Computer science, CUDA, Linear Algbera, nVidia, nVidia GeForce GTX Titan X, Package, Performance, Tesla K20

April 29, 2016 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

Parallel Wavelet Schemes for Images

TheanoLM – An Extensible Toolkit for Neural Network Language Modeling

Parallel Pairwise Correlation Computation On Intel Xeon Phi Clusters

TrimZero: A Torch Recurrent Module for Efficient Natural Language Processing

Fast hyperbolic Radon transform represented as convolutions in log-polar coordinates

Automatic Test Case Reduction for OpenCL

Polly-ACC: Transparent compilation to heterogeneous hardware

Exposing Errors Related to Weak Memory in GPU Applications

Array Program Transformation with Loo.py by Example: High-Order Finite Elements

On the design of sparse hybrid linear solvers for modern parallel architectures

Automatic Parallelization: Executing Sequential Programs on a Task-Based Parallel Runtime

Adaptive GPU Array Layout Auto-Tuning

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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