high performance computing on graphics processing units: hgpu.org

Dong He, Supun Nakandala, Dalitso Banda, Rathijit Sen, Karla Saur, Kwanghyun Park, Carlo Curino, Jesús Camacho-Rodríguez, Konstantinos Karanasos, Matteo Interlandi

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Tags: Benchmarking, Cloud, Computer science, CUDA, Databases, Machine learning, nVidia, Package, Tesla P100

March 6, 2022 by hgpu

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

Shenggan Cheng, Ruidong Wu, Zhongming Yu, Binrui Li, Xiwen Zhang, Jian Peng, Yang You

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Tags: Biology, Computer science, CUDA, Machine learning, nVidia, nVidia A100, Package

March 6, 2022 by hgpu

gLBM: A GPU enabled Lattice Boltzmann Method Library

Aaron Bray, Rachel B. Clipp, M. Umar Qureshi, Sorin Mitran, Andinet Enquobahrie

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Tags: cfd, CUDA, Fluid dynamics, Lattice Boltzmann model, nVidia, Package

February 20, 2022 by hgpu

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

Shamrock: Multi-GPU hydrodynamics for astrophysics

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

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high performance computing on graphics processing units: hgpu.org

Advanced Joins on GPUs

One-shot tuner for deep learning compilers

Data transfer optimizations for heterogeneous managed runtime systems

Migrating CUDA to oneAPI: A Smith-Waterman Case Study

Machine Learning for CUDA+MPI Design Rules

Concurrent CPU-GPU Task Programming using Modern C++

DISTAL: The Distributed Tensor Algebra Compiler

HipBone: A performance-portable GPU-accelerated C++ version of the NekBone benchmark

Integrating SkePU’s algorithmic skeletons with GPI on a cluster

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

gLBM: A GPU enabled Lattice Boltzmann Method Library

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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